Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03436 ATGAATTTGGTGAAGAAGTGTAAGAGGGTATTGGGAAGCAGCAAGAGTTTGTATGATCCACAAGACAGTAGTAGAAGTGGAAGCTATGGAAAATTATCAGACAAGTGTCACAAAAAGCAAAAAGATAATACTAAGAAACCACCAAATGGTTGTGTTTGTGTCTATGTTGGAGCTGAGAGACAAAGATTCATAATCAAGATCAAAATATTCAATCACCCTTTGTTCAAAACATTTTTGGAAGATGTTGAGAATGAGTATGGTTATAGAAATGATGGTCCTCTATGGCTTCCTTGTCATGTTGATTTGTTCTGTGAGGCTGTTGTGGAGATAGAGAGTGATGAGGTTGATATGGGTTTTGTAGGTTGCAATTTTCCTATGGTTCACAAACATAGCTCAGTTTCCCATGGTTGCAATTTTTACTATTTGAGTTCATGTGATGCCAGTTACGAGGTTTTGGTATGA 462 0.3701 MNLVKKCKRVLGSSKSLYDPQDSSRSGSYGKLSDKCHKKQKDNTKKPPNGCVCVYVGAERQRFIIKIKIFNHPLFKTFLEDVENEYGYRNDGPLWLPCHVDLFCEAVVEIESDEVDMGFVGCNFPMVHKHSSVSHGCNFYYLSSCDASYEVLV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03436 153 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 105 IPR003676 GO:0009733
Vifa6g03436 153 MobiDBLite consensus disorder prediction 16 30 - -
Vifa6g03436 153 MobiDBLite consensus disorder prediction 31 45 - -
Vifa6g03436 153 Pfam Auxin responsive protein 7 106 IPR003676 GO:0009733
Vifa6g03436 153 MobiDBLite consensus disorder prediction 15 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03436 Vifa-Chr6 1130804221 1130804682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03436 48 110 Calmodulin-binding Proteins AT4G34750 44.444 2.18e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03436 K14488 - gmx:102667331 142.895