Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03433 ATGAATTTAGTGATGAAGTGTAAGAGAGTATGGGGGAGCAGCAATAGGTTGTATGATTCAGAAGATAGCAATGGAAGTTGTAGCTATGACAAATTATCAGAAAAGTGTCTCAAAAAGCAAAAAAACAATACTAAGAAACCACCAAACGGTTGTGTTTGCGTCTACGTTGGATCTGAGAGACAAAGATTCATAATCAAAATTAAAATATTCAATCACCCTTTGTTTAAAACGCTTTTGGAAGGTGTTGAGAATGAATATGGTTATAGAAACGATGGTCCTTTATGGCTTCCTTGTGAAGTTGACTTGTTCAATGAAGCAGTTGTGGAGATAGAGAGTGCTGTTGGTTGCAGCTTTCCAGTTTCACGTTCTTCATTGTCCTGTCGTTCTAACCTCAGTTGTGCTGCTAATTACCAGATTTTGGTATAA 426 0.3709 MNLVMKCKRVWGSSNRLYDSEDSNGSCSYDKLSEKCLKKQKNNTKKPPNGCVCVYVGSERQRFIIKIKIFNHPLFKTLLEGVENEYGYRNDGPLWLPCEVDLFNEAVVEIESAVGCSFPVSRSSLSCRSNLSCAANYQILV 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03433 141 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 38 105 IPR003676 GO:0009733
Vifa6g03433 141 Pfam Auxin responsive protein 31 107 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03433 Vifa-Chr6 1129938864 1129939289 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03433 48 108 Calmodulin-binding Proteins AT4G34750 44.262 1.22e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03433 K14488 - gmx:102667331 134.035