Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03431 ATGAATTTAGTGAACAAGTGTAAGAAGGTATGGGGAAGCAACAATAAATTGTTTGATTCAAAAGAAAGTCCTGGCAGTTGCAGCTATGACAAATTATCAGAAAATTGTCACAAAGATATTACTAAGAAACCACCAAACGGTTGTGTTTGCGTCTATGTTGGATCTGAGAGACAAAGATTCATAATCAAGATCAAAATATTGAATCATCCTTTGTTCAAGTCACTTTTGGAAGATGTTGAGAATGAATATGGTTATAGAAACGATGGTCCTTTATGGCTTCCTTGTGAGGTTGACTTGTTCAATGAAGCAGTTGTGGAGATAGAGAGTGCTGTTGGTTGCATCTTTCCAGTTTCACGTTCTTCATTGTCCTGTCGTTCTAACCTCAGTTGTGCTGCCAATTACCAGATTTTGGTATAA 417 0.3693 MNLVNKCKKVWGSNNKLFDSKESPGSCSYDKLSENCHKDITKKPPNGCVCVYVGSERQRFIIKIKILNHPLFKSLLEDVENEYGYRNDGPLWLPCEVDLFNEAVVEIESAVGCIFPVSRSSLSCRSNLSCAANYQILV 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03431 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 34 102 IPR003676 GO:0009733
Vifa6g03431 138 Pfam Auxin responsive protein 29 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03431 Vifa-Chr6 1129907892 1129908308 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03431 45 105 Calmodulin-binding Proteins AT4G34750 45.902 1.35e-16 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03431 K14488 - gmx:102667331 125.176