Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03429 ATGGGTTTTGTTAGGAAGTGTAAGAGAGTATGGGGAAGCAAAAACAGGTTGCATCCAGAACACAGTTACGAAAAGCAAAAAGATAATAATACTAAGAAATCACCAAATGGTTGTGTTTGTGTCTATGTTGGAGTTGAGAGACAAAGATTCATAATCAAGATCAAAATATTTAATAATCCTTTGTTCAAGTCACTTTTAGAAGATGTTCAGAATGAGTATGGTTATAGAAATGATGGTCCTCTATGGCTTCATTGTGATGTTGAGTTTTTCTGTGAAGCACTTATGGAGATAGAGAGTTGTGTGGATGAGATGAGTTTTGTTGGTTGCAATTTTCCAATGAGTCATAAATTTAGGCCAGTTCACAATTACCAGGTTTTGGTATGA 384 0.349 MGFVRKCKRVWGSKNRLHPEHSYEKQKDNNTKKSPNGCVCVYVGVERQRFIIKIKIFNNPLFKSLLEDVQNEYGYRNDGPLWLHCDVEFFCEALMEIESCVDEMSFVGCNFPMSHKFRPVHNYQVLV 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03429 127 Pfam Auxin responsive protein 21 94 IPR003676 GO:0009733
Vifa6g03429 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 94 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03429 Vifa-Chr6 1129093696 1129094079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03429 35 114 Calmodulin-binding Proteins AT4G34750 35.000 1.21e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03429 K14488 - gmx:102667331 124.405