Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03400 ATGTCAGAGATGTGTGAGCCAAATTCAGAGAAAGCTTGTGAAGGTAGTAGTGCTGAGTCTCCAACTGCACCAGCTGGAAAACAACCTGAAGAAGCTGAACCGAAAACCAGTGAAAGAATCAAAGCCACCAGACATCCTAGATGGACAAGACAGGAGACACTTGTTTTGATTGAGGCAAAGAAAGTGATTGAGAATGGAGATCAAGTTTGCAGATACCGATCATCGACGTCGGGGCTGGTTCAAACCGACCCGAAATGGGATTTGGTTTCGTCGTTGTGTCAGCAGCATGGTGTCAAGAGAGGAGCTGTTCAGTGTAGGAAGAGATGGGGGAATCTTCTGACTGATTTCAGGAAGATCAAGAAATGGGAGACGAATGTGAAGGACGAGGCTGAGTCGTTTTGGATAATGAGGAATGATGTGAGGAAAGAGAATAAGTTGCCGGGTTTCTTTGATGCTGTTGTGTACAATGTGCTGGATGGAGGAGTTTGCACTGCTGCTGCTTTTCCACTGTCGCTTGTCAAAATGGCGCCGAGAGAGGAGAATGGCGATCAAGTTGAAGGTGCGGCTGCTGCAGCGGTGTTGGCATTAGAGCAGGGTAATAAAGAGGATGAGAATGAAGAGGAGAAGGATGAGGCCATTGCTGATAGTGAGAAAATGGGTTGGAGCACAGAGGAGGAAAACATCATGGAAACAAACGCGAACGGAAATATGGTTATGAGTCCATTCAAAACACCGAATCCTAAGAAAACCAGCGTTACAGGGAGTTTCAAATTGACACCTCCATCAATCCTACTGCCTAGTTCAGCAGTGAGACAGCAACAGCCATTTCCCCAAGGGAGCTTCGATCCAGGTTATCAGAGAGAAGCTATGTTCAATGAGGGGTACAAAAGAAAGAGACCATCACCAGATAATTCTGAAGACGCCGCAGATTTTACTGAAGATGTCATCAAAGTGCTAAGAAGGAATAGCAACATATTGAAAGCCCATCTTGGAGCTCAGAACATCAATACCAAATTGGCCAGAGACCAGCAGAAGCAGCAAACAGACAGCTTAGTTTCAGCCCTCGGCAGGCTTACAGATGCTATCACAAAAATTGCTGACAAGCTGTAA 1110 0.4595 MSEMCEPNSEKACEGSSAESPTAPAGKQPEEAEPKTSERIKATRHPRWTRQETLVLIEAKKVIENGDQVCRYRSSTSGLVQTDPKWDLVSSLCQQHGVKRGAVQCRKRWGNLLTDFRKIKKWETNVKDEAESFWIMRNDVRKENKLPGFFDAVVYNVLDGGVCTAAAFPLSLVKMAPREENGDQVEGAAAAAVLALEQGNKEDENEEEKDEAIADSEKMGWSTEEENIMETNANGNMVMSPFKTPNPKKTSVTGSFKLTPPSILLPSSAVRQQQPFPQGSFDPGYQREAMFNEGYKRKRPSPDNSEDAADFTEDVIKVLRRNSNILKAHLGAQNINTKLARDQQKQQTDSLVSALGRLTDAITKIADKL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03400 369 MobiDBLite consensus disorder prediction 1 45 - -
Vifa6g03400 369 Gene3D - 48 118 - -
Vifa6g03400 369 Pfam Myb/SANT-like DNA-binding domain 46 134 IPR044822 -
Vifa6g03400 369 ProSiteProfiles Myb-like domain profile. 47 113 IPR001005 -
Vifa6g03400 369 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 17 369 - -
Vifa6g03400 369 MobiDBLite consensus disorder prediction 31 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03400 Vifa-Chr6 1115831112 1115833459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03400 47 128 Trihelix Transcription Factor Family AT5G03680 31.325 3.13e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03400 - - tpra:123916032 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03400 6 1115831112 1115833459 Vifa6g03400 6 1115831112 1115833459 ECH