Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03317 ATGAATGCCTTAAATATTTTTGTTGTATTGGTGATCATGACAACTAGTCATGTTTATTGTCGGGAAGGTCATATGAGCGGTAAAAAGATAAGTGTACGTGTTGAAAATGACTTACAAGTTGACACTGTTCTTGTTTTACATTGCCGATCTTCAAACAATGATATTGGAGAAAAAACACTTCATAGTGGACAATTTGTGGAATGGTCTTTCAATGCAAATCCCAGCATTATTACTCTTTATTCATGTGACATAAAATGGAACAATAAGCAACAAAATTTCACAGTTTATGAATCAACAAAGGATGAAGCAACATGTACATCCAAATGTTATCGCGGTATTAGCGCACAAGGAATCTATTTTTTGAATGAGTTTAAAAACACATGGGAAAAACGATATTCATTAAATTAG 408 0.326 MNALNIFVVLVIMTTSHVYCREGHMSGKKISVRVENDLQVDTVLVLHCRSSNNDIGEKTLHSGQFVEWSFNANPSIITLYSCDIKWNNKQQNFTVYESTKDEATCTSKCYRGISAQGIYFLNEFKNTWEKRYSLN 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03317 135 Pfam Plant self-incompatibility protein S1 32 133 IPR010264 -
Vifa6g03317 135 PANTHER - 28 124 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03317 Vifa-Chr6 1086697118 1086697525 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03317 28 111 Carbohydrate Esterase AT3G16970 29.070 1.93e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03317 - - cam:101510822 139.813