Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03314 ATGAGTGCCTTGACTATTTTTGTTATATTGGTGATAATGACAACTAGTCATGTTCATTGTCGGGGAGGTCATATGAGCGGTAAGAAGATAACTGTACAAGTTGAAAATGACTTGCAAGTTGACACCGTTCTTGTTTTACATTGTCGGTCTTCAAACAATGATCTTGGAGAAAAAACACTTCATAGTGGGCAATATGAGAAATGGACTTTCAATGGAAATCCCAGCAGCATTACTCTCTATTCATGTGACATAAAATGGAACAATAAGCAACAAAATTTCACAGTTTATGAATCAACAAAGGATGAAGCAACATGTACATCCAAATGTTATCGCGGTATTAGCGCAGAAGGAATCTATTTTTTCAATGAGTTTAAAAACACTTGGGAAAAGCGATATTCATTAAATTAG 408 0.3505 MSALTIFVILVIMTTSHVHCRGGHMSGKKITVQVENDLQVDTVLVLHCRSSNNDLGEKTLHSGQYEKWTFNGNPSSITLYSCDIKWNNKQQNFTVYESTKDEATCTSKCYRGISAEGIYFFNEFKNTWEKRYSLN 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03314 135 Pfam Plant self-incompatibility protein S1 31 133 IPR010264 -
Vifa6g03314 135 PANTHER - 28 123 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03314 Vifa-Chr6 1085851756 1085852163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03314 28 111 Carbohydrate Esterase AT3G16970 30.233 4.20e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03314 - - cam:101510822 139.428