Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03306 ATGACAACTAGTCATGTTCATTGTCGGGGAGGTCATATGAGCGGTAAGAAGATAACTGTACAAGTTGAAAATGACTTGCAAGTTGACACCGTTCTTGTTTTACATTGTCGGTCTTCAAACAATGATCTTGGAGAAAAAACACTTCATAGTGGGCAATATGAGAAATGGACTTTCAATGGAAATCCCAGCAGCATTACTCTCTATTCATGTGACATAAAATGGAACAATAAGCAACAAAATTTCACAGTTTATGAATCAACAAAGGATGAAGCAACATGTACATCCAAATGTTATCGCGGTATTAGCGCAGAAGGAATCTATTTTTTCAATGAGTTTAAAAACACTTGGGAAAAGCGATATTCATTAAATTAG 372 0.3548 MTTSHVHCRGGHMSGKKITVQVENDLQVDTVLVLHCRSSNNDLGEKTLHSGQYEKWTFNGNPSSITLYSCDIKWNNKQQNFTVYESTKDEATCTSKCYRGISAEGIYFFNEFKNTWEKRYSLN 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03306 123 PANTHER - 16 111 IPR010264 -
Vifa6g03306 123 Pfam Plant self-incompatibility protein S1 19 121 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03306 Vifa-Chr6 1085718638 1085719009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03306 16 99 Carbohydrate Esterase AT3G16970 30.233 2.99e-08 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03306 - - cam:101510822 138.272