Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03303 ATGTTGAAGGTCTTATCATTACTTAGTATCATATTGATGATTATTGCAATTTCGGTCCCTACACATGGTGAAGTTGATTGGAGTCCTACAAAGACAAATGTACGTGTTGAAAACCAATTAGGCACAAACGTTTTTATACATTGTAAATCATCAGACAGTGATCTTGGTGACCATAATGTTTATAACAATGATTATGTAGAATGGTCATTTAGAGCCAACATTCGTGGTACCACTTCATTTTCTTGTGCCTTGTTTTGGGGTGACAATGTGCATCAGAACATAGTAATTTATGATGCTAAGATAGATGAGTCATTGTGTATTTCCAAATGTTTGCGAGTCCTTAAACCTGATGGAGCCTATTTTTACCATCAATACAAAGATACGTGGGAGAAAAGATATTCATGGTAA 408 0.3505 MLKVLSLLSIILMIIAISVPTHGEVDWSPTKTNVRVENQLGTNVFIHCKSSDSDLGDHNVYNNDYVEWSFRANIRGTTSFSCALFWGDNVHQNIVIYDAKIDESLCISKCLRVLKPDGAYFYHQYKDTWEKRYSW 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03303 135 Pfam Plant self-incompatibility protein S1 34 135 IPR010264 -
Vifa6g03303 135 PANTHER - 30 124 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03303 Vifa-Chr6 1085324326 1085324733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03303 18 119 Carbohydrate Esterase AT3G16970 29.907 1.89e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03303 - - mtr:25501956 171.4