Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa6g03302 | ATGTTGAAGGTCTTATCTTTACTTAGTATCATATTGATGATTATTGCAATTTCAGTCCCTACACATGGTGAAGTTGATTGGAGTCCTACAAAGACAAATGTACGTGTAGAAAACCAATTAGGCACAAACGTGTTTATACATTGTAAATCATCAGACAGTGATCTTGGTGACCATAATGTTTTTAACAACGATTATGTAGAATGGTCTTTTAGAGCCAACATTCGTGGTACCACTTCATTTTCTTGTGCCTTGTTTTGGGGTGACAATATGCATCAGAACATAGTAATTTATGATGCTAAGATAGATGAGTCATTGTGTATTTCCAAATGTTTGCGAGTCCTTAAACCTGATGGAGCCTATTTTTACCATCAATACAAAGATTCGTGGGAGAAAAGATATTCATGGTAA | 408 | 0.3505 | MLKVLSLLSIILMIIAISVPTHGEVDWSPTKTNVRVENQLGTNVFIHCKSSDSDLGDHNVFNNDYVEWSFRANIRGTTSFSCALFWGDNMHQNIVIYDAKIDESLCISKCLRVLKPDGAYFYHQYKDSWEKRYSW | 135 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa6g03302 | 135 | Pfam | Plant self-incompatibility protein S1 | 34 | 135 | IPR010264 | - | |
| Vifa6g03302 | 135 | PANTHER | - | 30 | 124 | IPR010264 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vifa6g03302 | Vifa-Chr6 | 1084919561 | 1084919968 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vifa6g03302 | 18 | 119 | Carbohydrate Esterase | AT3G16970 | 29.907 | 1.93e-08 | 48.1 |