Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03301 ATGTTGAAGGTCTTATCTTTACTTAGTATCATATTGATGATTATTGCAATTTCAGTCCCTACACATGGTGAAGTTGATTGGAGTCCTACAAAGACAAATGTACGTGTAGAAAACCAATTAGGCACAAACGTGTTTATACATTGTAAATCATCAGACAGTGATCTTGGTGACCATAATGTTTTTAACAACGATTATGTAGAATGGTCTTTTAGAGCCAACATTCGTGGTACCACTTCATTTTCTTGTGCCTTGTTTTGGGGTGACAATGTGCATCAGAACATAGTAATTTATGATGCTAAGATAGAGTCATTGTGTATTTCCAAATGTTTGCGAGTCCTTAAACCTGATGGAGCCTATTTTTACCATCAATACAAAGATTCGTGGGAGAAAAGATATTCATGGTAA 405 0.3531 MLKVLSLLSIILMIIAISVPTHGEVDWSPTKTNVRVENQLGTNVFIHCKSSDSDLGDHNVFNNDYVEWSFRANIRGTTSFSCALFWGDNVHQNIVIYDAKIESLCISKCLRVLKPDGAYFYHQYKDSWEKRYSW 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03301 134 PANTHER - 30 123 IPR010264 -
Vifa6g03301 134 Pfam Plant self-incompatibility protein S1 34 134 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03301 Vifa-Chr6 1084899436 1084899840 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03301 18 118 Carbohydrate Esterase AT3G16970 27.358 7.80e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03301 - - mtr:25501956 164.081