Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03300 ATGTTGAAGTCCTTAACTTTACTCAGCATCTTATGGATGATTATTTCAATTTTAGCCCTAACTCAGGGTCAGCAAGTTGATTGGAGTCCCACAAAAACAACAGTGCGTGTATCAAATGATCTTGGCACCGATCTTAATATGCATTGTAAATCATCAGACGATGATCTTGGCAGCCATGATGTCCTTCAAGGTGAATATACAGAATGGTCTTTCCGAGCTAACATTCGAGGTACCACTTTGTTTACGTGCGTCTTTCAATGGGACAATGTGAGAAAGAACGTGGTAATTTATGATGCTAAGAAAGATGAAGATTTATGTATTTCTCAGTGTTGGAGAACTCTTAGAACTGATGGAGCTTATTTTTATAATCAGTATAGAAAGTCTTGGGAGAAAAGATACTCGTGGTAA 408 0.3775 MLKSLTLLSILWMIISILALTQGQQVDWSPTKTTVRVSNDLGTDLNMHCKSSDDDLGSHDVLQGEYTEWSFRANIRGTTLFTCVFQWDNVRKNVVIYDAKKDEDLCISQCWRTLRTDGAYFYNQYRKSWEKRYSW 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03300 135 PANTHER - 30 129 IPR010264 -
Vifa6g03300 135 Pfam Plant self-incompatibility protein S1 34 135 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03300 Vifa-Chr6 1084230535 1084230942 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03300 13 124 Carbohydrate Esterase AT3G16970 32.800 2.26e-12 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03300 - - mtr:25501956 207.608