Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03298 ATGTTGAAGGTCTTATCTTTACTTAGTATCATATTGATGATTATCGCAATTTCAGTCCCTACACATGGTGAAGTTGATTGGAGTCCTACAAATACAAATGTACGTGTTGAAAACCAATTAGGCACAAACGTTTTTATACATTGTAAATCATCAGACAGTGATCTCGGTGACCATAATGTTTCTAACAATGATTATGTAGAATGGTCTTTTAGAGCCAACATTCGTGGTACCACTTTATTTTCTTGTGCCTTGTTTTGGGGTGACAATGTGCATCAGAATATAGTAATTTATGATGCTAAGATAGATGAGTCATTATGTATTTCCAAATGTTTGCGAGTCCTTAAACCTGATGGAGCCTATTTTTACCATCAATACAAAGATACGTGGGAGAAAAGATATTCATGGTAA 408 0.3456 MLKVLSLLSIILMIIAISVPTHGEVDWSPTNTNVRVENQLGTNVFIHCKSSDSDLGDHNVSNNDYVEWSFRANIRGTTLFSCALFWGDNVHQNIVIYDAKIDESLCISKCLRVLKPDGAYFYHQYKDTWEKRYSW 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03298 135 PANTHER - 30 124 IPR010264 -
Vifa6g03298 135 Pfam Plant self-incompatibility protein S1 34 135 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03298 Vifa-Chr6 1083965678 1083966085 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03298 18 119 Carbohydrate Esterase AT3G16970 30.841 1.72e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03298 - - mtr:25501956 168.318