Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03288 ATGGAACCACGGCTTTCTGGTTTATGCACCAAGAAGAAAATTGAGAAATACTCTACACCATCAAAAGTGATGTTTGTGCTTCCAAGAAGTGCCACTGATGACATTAACTTTGATGGTGAAAGTTTTCACAATTTTTTCGAGTGTTGGATGGTTGAGCAAAACAAATATCTGAATGAACTTGTGACGGCGAATTCGGCTCAACCTCAGCTCACAGATGACACAATGCATACCCTGATTGATAAGGTTGTTGAGCATCATGAGTATTACTACAGAGAAAAAGCTAGGTGTGCAAAGAAAGATGTTTTGTCCATGTTTTCACCACCATGGTTAAGCTCTTTAGAAGCGGCTTTTCTTTGGATTGGTGGTTGGAGACCAAGCATGGCATTTCATTTACTATATTCAAAATGCAGCATGCAATTTCAAGCTAGGTTGAATGACCTTATTCGAGGACAAAAAACATGTGATCTGGGAGATCTCTCGGCGTCTCAGCTCACCGAGTTTGATGATTTGCAAAGGAGGACTATTAGAGAGGAGAGGGAAATCACTAATATGATGGCCGAGCATCAGGAAACAATGCCCGATGCTTCGATGGTGGAGCTGTCTCATGTGATTTCTGAAATGATTGGACAAGGAGAAAATGAGAAGAAGGAACTGGAAGAGAGAATTGAATCAGTTCTTGAAGCTAAGCTGGAAGGTTTGGAGAAGATTCTTCATAGAGCTGATGATTTAAGGCTGAGAGCTTTGCAGGGGATTGTTAATATCCTGACTCCAAAGCAAGCTATTTACTTCTTGATTGCTGCTGCAGAGCTGCACCTGAGGCTACATGAATGGGGTAAGAAGAAGGATGATGCCAAAAGGAGCAAACAAGGTAACAGGGAGGGTGAAAGCCATAATTCATGA 900 0.4178 MEPRLSGLCTKKKIEKYSTPSKVMFVLPRSATDDINFDGESFHNFFECWMVEQNKYLNELVTANSAQPQLTDDTMHTLIDKVVEHHEYYYREKARCAKKDVLSMFSPPWLSSLEAAFLWIGGWRPSMAFHLLYSKCSMQFQARLNDLIRGQKTCDLGDLSASQLTEFDDLQRRTIREEREITNMMAEHQETMPDASMVELSHVISEMIGQGENEKKELEERIESVLEAKLEGLEKILHRADDLRLRALQGIVNILTPKQAIYFLIAAAELHLRLHEWGKKKDDAKRSKQGNREGESHNS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03288 299 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 40 292 - -
Vifa6g03288 299 MobiDBLite consensus disorder prediction 279 299 - -
Vifa6g03288 299 Coils Coil 208 228 - -
Vifa6g03288 299 ProSiteProfiles DOG1 domain profile. 39 284 IPR025422 GO:0006351|GO:0043565
Vifa6g03288 299 Pfam Seed dormancy control 57 134 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03288 Vifa-Chr6 1082309808 1082310707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03288 4 274 Calmodulin-binding Proteins AT1G22070 26.199 3.38e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03288 - - cam:101504084 422.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03288 6 1082309808 1082310707 Vifa6g03288 6 1082309808 1082310707 ECH