Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03284 ATGAAAACCCTCTCTCTTCCGCCGTTGTTTGCTCATACTCCTAGAGCTTTTGGAAACGGTTTAACCTTAACCACAAAGTGTTTTCCCAAGCAACTTCATTTCAACTCTCCATGTCTTGTTTTCTCTACACACTCGAATTCTGCAACTCTATCTGTGGAATCACAAGTAGAAACGAAGCAAGTATTTGATGGAGACAAGGCTTCTTTGCTTGTTAGTGAGCTTAGAAAGAATTTTGATTCAGGTAAGACTAAGAGTTATGAATGGCGGATTTCGCAATTGGAGTCCATAGCTAACATGTTAGTTGAGAAAGAGGAACAAATTATTGATGCTCTTGTTAAGGACCTTTCTAAACCTAGAACGGAAGCATATATAACTGAGATATTCCAGGTGAAATCTTCATGTAATGAAACACTTCAAGAACTCAAGCACTGGATGAAGCCTGAAAAGGTCAGCACTTCAATCACAACATTTCCATCATCAGCAGAGATTGTTTCAGAACCATTAGGAGTTGTGTTGATCATATCGACATGGAACTTTCCTTTCTCATTATCATTGGATCCGATCATTGGAGCGATTGCAGCAGGCAACACAGTGGTTTTGAAACCATCCGAAATTTCTCCTGCAGTATCATCCCTGCTTGCAAATTTGCTAGCAACTTATCTAGATAATTCTGCAGTAAGAGTTGTTGAAGGTGCTGTTCCTGAAACAACTGCACTCTTGGAACAGAAGTGGGATAAGATACTTTATACAGGTAGTGCTCGAGTAGGTCGCATTGTTATGGCTGCAGCTGCAAAGCATCTTACTCCAGTGATTCTGGAGCTTGGAGGAAAATGTCCGGCTGTTGTTGATTCAAATATCAACTTACAAGTCACTGCTAGGAGGATAATAGCTGGCAAATGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAAGAAAAGACTTTGCTCCAACACTTATAACTGCTTTAAAAGAAGAGTTAGAGCAATTTTTCGGGAAAGATCCGATAGAATCGAAAGACATGTCTCGTATTGTGTCTCCAACCCAATTCGCACGACTTGTGAGACTCTTGGATGATGATAAGGCATCTGATAAAATTGTTTTAGGAGGTCAGAGAGATGAGAAGAAATTAAAGATTGCTCCAACTATCTTATTAGATGTTCCAGAAGAAGCTATGGTTATGCAAGAGGAGATATTTGGGCCAATATTACCAATTATCACTGTAGACAACATAGAAGATAGTTTCAGTATAATAAAATCAAGGCCAAAACCTCTCGCAGCATATCTCTTCACAAACAATGAGCAGCTGAAGAAGGATTATGTTGATAAGATATCTTCTGGAGGAATGCTCATCAACGACGCTGTTGTGCATGTAGTTGCAACTCGTGGATTGCCTTTTGGAGGAGTTGGAGAGAGTGGAATGGGCGCTTACCATGGAAAGTTCTCTTTTGACGGTTTCAGCCATAAGAAGGCAGTTTTATATAAAGGTTTTGGTTCAGATCCATCCATAAGGTATCCACCATACACGCCGGAGAAGGTAAAATTGTTGAGGGCCATTTTAGATGGTAGTATTTTTCATATTATTCTTGCTTTGCTTGGATGGTCTAAATAA 1626 0.3973 MKTLSLPPLFAHTPRAFGNGLTLTTKCFPKQLHFNSPCLVFSTHSNSATLSVESQVETKQVFDGDKASLLVSELRKNFDSGKTKSYEWRISQLESIANMLVEKEEQIIDALVKDLSKPRTEAYITEIFQVKSSCNETLQELKHWMKPEKVSTSITTFPSSAEIVSEPLGVVLIISTWNFPFSLSLDPIIGAIAAGNTVVLKPSEISPAVSSLLANLLATYLDNSAVRVVEGAVPETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVILELGGKCPAVVDSNINLQVTARRIIAGKWACNSGQACISVDYIITRKDFAPTLITALKEELEQFFGKDPIESKDMSRIVSPTQFARLVRLLDDDKASDKIVLGGQRDEKKLKIAPTILLDVPEEAMVMQEEIFGPILPIITVDNIEDSFSIIKSRPKPLAAYLFTNNEQLKKDYVDKISSGGMLINDAVVHVVATRGLPFGGVGESGMGAYHGKFSFDGFSHKKAVLYKGFGSDPSIRYPPYTPEKVKLLRAILDGSIFHIILALLGWSK 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03284 541 PANTHER ALDEHYDE DEHYDROGENASE 67 532 IPR012394 GO:0006081
Vifa6g03284 541 FunFam Aldehyde dehydrogenase 276 477 - -
Vifa6g03284 541 PIRSF ALDH 48 536 IPR012394 GO:0006081
Vifa6g03284 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 75 495 IPR016162 GO:0016491
Vifa6g03284 541 Pfam Aldehyde dehydrogenase family 67 497 IPR015590 GO:0016491
Vifa6g03284 541 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 276 477 IPR016163 GO:0016620
Vifa6g03284 541 SUPERFAMILY ALDH-like 71 511 IPR016161 GO:0016491
Vifa6g03284 541 FunFam Aldehyde dehydrogenase 75 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03284 Vifa-Chr6 1082264964 1082268000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03284 18 541 Aldehyde Dehydrogenase Gene Family AT4G34240 63.550 0.0 669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03284 6 1082264964 1082268000 Vifa6g03284 6 1082264964 1082268000 ECH