Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03255 ATGGCAATTTTGAAAAACTTAACCGTAGATGAAATGGTGTGTTACTCACCAACTATGATAACAACAAATGGGATATGGCAAGGAGACAACCCTTTGGATTATGCTCTTCCTCTCTTCATCCTTCAAGTTATTTTAGTTGTTGTTGCCACGCGAATCTTCGTCTTCGTACTCAAGCCTATTCGCCAACCACGCGTCATAGCTGAAATCTTGGGAGGGATAGTGTTAGGTCCTTCTGTTCTTGGAAGAAACAAAACATTTGCTAATGCAGTTTTTCCTCTAAGAAGTGTGATGGTGATTGAAACAATGGCAAATGTTGGTCTTTTGTATTTTCTATTCTTGGTTGGAGTAGGGATGGATGCATCTGCAATAAGAAGGATGGGTAGAAAATCAGTCACCATAGCAGTTTCTGGTATGGTGTTACCATTTGGGACGGGAGCCCTATTTTCGATCTTTCTGATGAAAGACAGTGAGAAAGCCACAAATGGAAGTGCTTATGTGTTAATTCTTGGTGTTGTTCTTTCTGTCACTGCGTTTCCTGTTCTTGCTAGGATCCTTGCAGAGTTAAAACTGATAAACTCGGAGTTGGGAAGGGTTGCTCTTTCAGCTGCAATCATTAACGATGTTCTGTCATGGATGCTTTTGGCTATAGCTATTGCTTTAGCAGAAGATGAAAGAATTTCCGTGGCTTCTGTAATGGTTGTTTTGTCGAGTGCTGCATTTGTCGCCTTTAATGCTTTTGTCGTAAGACCAATAATCATGTGGATAATAAGGAAAACACCAGAAGGAGAATCGTTTAGTGATTTCTATATATGTTTGATACTAGCAGGTGTGATGATATCAGGTTTCATCACAGATGCTATTGGAACTCATTCGGTTTTCGGTGCTTTTGTGTTTGGTTTGATTATTCCAACTGGTCCACTTGGTTTCGCGCTTATTGAAAAGCTAGAGGACTTTGTTTCTGGCCTATTGCTTCCTCTCTTTTTCGCAATTAGTGGATTGAAGACTAATGTTAGTCTCATCACTGGTGCTTCGAAATGGGCCATTATAGTCATTCTTGTAATCCTGGCTTGTATTGGTAAAGTTGTTGGAACTTTAATCGTTTCTATTAGCTATCAAATGTCACTTTCTGAAGGTGCTGCTCTTGGCATGCTCATGAACACGAAAGGCCTAGTTGAAATTCTAGTTCTTAACATCGGTCGAGATCAAAAGGTTTTGGACGAGGAATCGTTCGCGACAATGGTGGTTATAACAATACTAATGACAGGAATGATTGTGCCGGCAATATCAATTATATATAGACCATCAAGAGGGTTGATATCTTACAAAAGAAGAACAATTCAAATGTCGAAAAAAGATGCAGAGTTTAGAGTACTAGTGTGTATTCATACCCCAAGAAATGTTCCAACAATGATAAACCTCCTAGAAGCCTCAAATCCAACTAAAAAATCACCAATATGTATCTATGTGCTTCATTTGGTTGAACTCACGGGTCGAACATCGGCGTTACTCATTGTTCACACATCGAAAAAATCAGATCACACTGCTCTCAACAGAACTGAAGCTCAATCTGATCACATAATCAACGCCTTTGATAACTACGAACAACACGCGGAACATGTATCAGTCCAACCTTTAACAGCAATCTCCCCTTACTCCACAATGCACGAAGATATATGCAGTTTAGCAGAAGAAAAACGCGTCGCGTTTATAATCATCCCTTTTCATAAACAGCAGACAGTCGATGGAGGAATGGAAGCAACAAACATGTCGTTTCGGACAGTTAACCAAAACGTGTTGGCGAATTCGCCTTGTTCAGTTGGAATTCTAGTAGATAGAGGCTTAAACAGTTCAAACCGTTTAGTTGCTGATCAAATGTCACATCATGTAGCAGTTTTGTTTTTCGGAGGACCAGACGATAGAGAAGCGTTAAGCTACGGTTGGAGAATGTCGGAACATACTGGAATAAGCCTAACCGTAATGCGCTTCGTTCCTGGAGAAGACGCGGCGATGAGCGAAAGTAGTACTAGTCATAACAACAATGCAGATAAACAAAGAGTTCTAACAGTCGAAACAGACGGGGACCAAGAAACTGATAAACAACTCGACGAGAGATTCTTACATTGGTTCATGATGAGTCATGTCAACGATGATTCAATTGCGTATATCGAAAAAGTTGTGAACAACGGGGAGGAAACAGTTGCGGCGATAAGGTCAATGGGAGATGTTTTTGGGCTATTTATAGTTGGGAGAGGACAAGGAGTAATATCACCACTGACTGCAGGACTTACTGATTGGAGTGAATGTCCTGAGTTAGGTGCAATTGGTGATTTGTTAGCATCTTCTGATTTTGCAACAGTTGCATCAGTTTTGGTGGTTCAACAATATGTTGGTGCTGGTTTAGAAGATGGATTGGGAACACCTGTGTTAAATGAAGAATATGGTGGTGGAAATCAATCAACTTTTATGCCACCAAGGGGGAGCCAAACTGTTACTTCACCAAGGGGGCATCAATCTGTTTTTATCCGCCTCCTTCACTCTGATCACCGATTTCCCTCTGACGTGTTTCGCTTCCCACCTTCATCACTTCCGTTCCAGCAAACCTCCGTCTTCTTCTCTACAACACAGGCCGGCCTCCGCTCAACGCTCGCAACATCCCTACGCATCTTCAGCATCGCAAGTTCGCGGCCTCCTCCACCAGTCTGTCCTCCTCGCAATTCTCTCGATTTTCCATCACCACTAAGGTCAATTGAATCAAGTGAATACAACACAAGAAAGTACATGTCCACCAACTCAGGAGGTATCTTCTAA 2808 0.416 MAILKNLTVDEMVCYSPTMITTNGIWQGDNPLDYALPLFILQVILVVVATRIFVFVLKPIRQPRVIAEILGGIVLGPSVLGRNKTFANAVFPLRSVMVIETMANVGLLYFLFLVGVGMDASAIRRMGRKSVTIAVSGMVLPFGTGALFSIFLMKDSEKATNGSAYVLILGVVLSVTAFPVLARILAELKLINSELGRVALSAAIINDVLSWMLLAIAIALAEDERISVASVMVVLSSAAFVAFNAFVVRPIIMWIIRKTPEGESFSDFYICLILAGVMISGFITDAIGTHSVFGAFVFGLIIPTGPLGFALIEKLEDFVSGLLLPLFFAISGLKTNVSLITGASKWAIIVILVILACIGKVVGTLIVSISYQMSLSEGAALGMLMNTKGLVEILVLNIGRDQKVLDEESFATMVVITILMTGMIVPAISIIYRPSRGLISYKRRTIQMSKKDAEFRVLVCIHTPRNVPTMINLLEASNPTKKSPICIYVLHLVELTGRTSALLIVHTSKKSDHTALNRTEAQSDHIINAFDNYEQHAEHVSVQPLTAISPYSTMHEDICSLAEEKRVAFIIIPFHKQQTVDGGMEATNMSFRTVNQNVLANSPCSVGILVDRGLNSSNRLVADQMSHHVAVLFFGGPDDREALSYGWRMSEHTGISLTVMRFVPGEDAAMSESSTSHNNNADKQRVLTVETDGDQETDKQLDERFLHWFMMSHVNDDSIAYIEKVVNNGEETVAAIRSMGDVFGLFIVGRGQGVISPLTAGLTDWSECPELGAIGDLLASSDFATVASVLVVQQYVGAGLEDGLGTPVLNEEYGGGNQSTFMPPRGSQTVTSPRGHQSVFIRLLHSDHRFPSDVFRFPPSSLPFQQTSVFFSTTQAGLRSTLATSLRIFSIASSRPPPPVCPPRNSLDFPSPLRSIESSEYNTRKYMSTNSGGIF 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03255 935 Pfam Sodium/hydrogen exchanger family 44 423 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa6g03255 935 FunFam Cation/H(+) antiporter 15 38 439 - -
Vifa6g03255 935 Gene3D - 480 751 - -
Vifa6g03255 935 Gene3D - 38 436 IPR038770 -
Vifa6g03255 935 PANTHER CATION/H + ANTIPORTER 13 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03255 Vifa-Chr6 1073945242 1073951864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03255 12 807 Antiporter Super Family AT2G13620 67.629 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03255 K26731 - twl:120012487 1128.62