Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa6g03182 | ATGTATGCTTCTATTTCCTTTATTTCACAGCATGAGTTTCTTGTGGAATCCCACACAAGAAGGCTACTCTTCCAAGGCCCAATAGATCATCAATCGTTAAAAACCTCCCATGTTCTCACACACAACAATTCAACAAATTTATATTTTGGTCTTAGTGAAACTGATGCAAATGTTGTGATGATACTTGCAGTCCTATTGTGTGCTCTTATATGTTCACTTGTATTAAACTCCATCATAAGGTGTGCCTTGAGGTTTTCAAACCTAGCCATCAACAACGACTCTTCTTCAAGTTCGAGCAGCTACTCTTCACCTCATTTGGTGAACAAAGGAATCAAGAAGAAGGCTCTCAAAACATTTCCAACAGTAAGTTATTCAAGTGAGTTGAAGTTACCATGTTTGGATACGGAGTGTGTGATATGTATCTCAGAATTTACAAAGGGTGAAAAGGTGCGCATATTGCCTAAATGCAACCACGGTTTTCATGTTGGTTGCATTGACAAATGGCTAAAGGCACACACATCATGCCCCAAGTGCAGACAGTGCCTCCTTGAGACTTGTCGAAAGATTGTTCGATTGGAAGCTCCACCACCTATGTTGCCGGTGCAAGAAACTATTATACCCATCCAACCGCTAAACCGCGAAGCTGTTGAGAGTAGCTATAGGGAAGAAAGCAGATAA | 678 | 0.4086 | MYASISFISQHEFLVESHTRRLLFQGPIDHQSLKTSHVLTHNNSTNLYFGLSETDANVVMILAVLLCALICSLVLNSIIRCALRFSNLAINNDSSSSSSSYSSPHLVNKGIKKKALKTFPTVSYSSELKLPCLDTECVICISEFTKGEKVRILPKCNHGFHVGCIDKWLKAHTSCPKCRQCLLETCRKIVRLEAPPPMLPVQETIIPIQPLNREAVESSYREESR | 225 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa6g03182 | 225 | CDD | RING-H2_EL5-like | 136 | 179 | - | - | |
Vifa6g03182 | 225 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 98 | 183 | IPR013083 | - | |
Vifa6g03182 | 225 | ProSiteProfiles | Zinc finger RING-type profile. | 137 | 179 | IPR001841 | - | |
Vifa6g03182 | 225 | SUPERFAMILY | RING/U-box | 116 | 184 | - | - | |
Vifa6g03182 | 225 | SMART | ring_2 | 137 | 178 | IPR001841 | - | |
Vifa6g03182 | 225 | FunFam | RING-H2 finger protein ATL73 | 96 | 184 | - | - | |
Vifa6g03182 | 225 | PANTHER | RING-H2 FINGER PROTEIN ATL78 | 12 | 215 | IPR044602 | GO:0016567|GO:0016740 | |
Vifa6g03182 | 225 | Pfam | Ring finger domain | 136 | 179 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa6g03182 | Vifa-Chr6 | 1050790725 | 1050791402 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa6g03182 | 50 | 198 | C3H Transcription Factor Family | AT3G10910 | 48.052 | 1.97e-41 | 137 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa6g03182 | K19040 | - | gmx:100780127 | 278.1 |