Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03175 ATGAAAAGAGACAATCCTTATATGATTGTGATAATCATACAAGCCATATATGCAGCCATGTTTCTTCTGTCAAAAGCCGCATTCGACCATGGCATGAACAATTTCATCTTTGTCTTCTACAGACAGTCTGCAGCAACAATTTTCCTAACACCTTTTGCTCTCTTCTTTGAATGGAAAAGTGCACCGCCTTTACGATTCAAAACCTTTTGCAAGATCTTCTTCCTTTCTTTCATTGGGATAACTTTGAGCTTAAACATATATGGTGTTGCTTTAATAAACACTTCTGCAACTTTGGCTGCTGCTACTACTAACTGTCTTCCAGTTATTACCTTCTTCTTGGCACTCCTATTCAGGATCGAAGTTTTGAAAGTAAAAACAGCTGCTGGGGCAGCTAAGTTGGCTGGTGTTGTGGCATGTTTGGGTGGAGCAGCAACTCTTGCTTTTTATAAAGGACCTCATTTAGAACTTTCAAGTCATTTTCACTTTTTGGGGAATTACCATAAAACCCAACAACAACATCAGGGCCATGTTCTATCTGGCTCATCATGGATCAAGGGTTGCTTCCTCATGCTTCTTTCTAATACCTTTTGGGGAATGTGGCTTGTTCTACAAACGTTTATCGTAAAAGGATATCCTTCAAAGCTGCTACTCACGACTCTTCAATGTTTTTTAAGTTCAATTCAGTCTCTGGTCGTAGCATTGGCCGTAGAACGAGACTTTGAACAATGGAAATTGGGTTGGAATGTCAGACTCGTCGCTGTGTTATATTGTGGAATTATGGTGACTGGTGTGACATATTACTTACAAACATGGGTTATAGAGAAGAGAGGACCAGTGTTTCTAGCCATGTCGACACCACTAGCTTTGATCATGACTATGTTCTCCTCAGCAATTCTCTTGGGAGAGATAATAAGTTTGGGAAGCCTTTTAGGTAGTTGTGCATTGGTTTTAGGACTGTACTGTGTGCTGTGGGGAAAGAGCAGAGAGCAAATGCCGAAAGCTTCCTTAGACATGGAGCAAGCTTCGGGTTTGAACGAACCAAATAAGTGA 1050 0.4076 MKRDNPYMIVIIIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQSAATIFLTPFALFFEWKSAPPLRFKTFCKIFFLSFIGITLSLNIYGVALINTSATLAAATTNCLPVITFFLALLFRIEVLKVKTAAGAAKLAGVVACLGGAATLAFYKGPHLELSSHFHFLGNYHKTQQQHQGHVLSGSSWIKGCFLMLLSNTFWGMWLVLQTFIVKGYPSKLLLTTLQCFLSSIQSLVVALAVERDFEQWKLGWNVRLVAVLYCGIMVTGVTYYLQTWVIEKRGPVFLAMSTPLALIMTMFSSAILLGEIISLGSLLGSCALVLGLYCVLWGKSREQMPKASLDMEQASGLNEPNK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03175 349 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Vifa6g03175 349 Pfam EamA-like transporter family 7 131 IPR000620 GO:0016020
Vifa6g03175 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 148 - -
Vifa6g03175 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 328 - -
Vifa6g03175 349 PANTHER WAT1-RELATED PROTEIN 6 333 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03175 Vifa-Chr6 1049935808 1049937760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03175 1 257 Nodulin-like Gene Family AT5G64700 61.686 1.56e-98 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03175 - - gmx:100796986 504.212