Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa6g03171 | ATGATTGAAGCGGGTCAAGTGAATGAAGTTCGTGAGTTTTTCAACCAAAAAGATTTTGATTACGATTACACTAGAGGGATACGAAGAGCCATTGGTGTACCTGAATTTGATGAGTTTTTTAGAGCGGAGTCACAAGGTGTAACAGATGGAAGAACTATGAAGAAGATTCTAGAAGTAGCTACTGATGCTCTTAAAGTGAATAATTGTAAGCTTGCGAGTAAACAAGTTAAGAAGATTCATAGGCTTTATGGTATATGGAAAAAGAACATGCACCGTCTTGATGCTACGGAGGTTGTGCTTAAGGAAGATAATTGGGAGGATCGTGTGTTGGCGAAGAGTCTTAGGATTGTACACAAGTTTTTATACGAGGATGGTGGTAATGGTGGTTGTATTGAGCCTGCAAAAATTCCGATTGTGGCAGGGTTTTCACATGTGCTTATCTGTCCAAAGCGCGAAGTTAAGCGTTTTCTTGATCTAACTGCTGAGGAGACTTCTGATTTATGGCTCACTGCACAAAAAGTCGGCAGGCAGCTTGAGAGCTACCACAAGGCTTCATCACTCAATTTGGCCATCCAAGATGGGCCCCAAGCAGGACAGACAGTACCTCATGTTAACATTCATGTTGTCCCGCGGAAAGGTGGTGATTTTGAGAAGAATGACGAGATATATGATGCAATGGATGAAAAGGAGAAGGAATTGAAGGAAAAACTTGATTTGGACAAGGAGAGGAAAGACACGAGCGCGGAAGAGATGTCACAAGAGGCAGAGGAATACAGAAAACTTTTCTTGTAA | 792 | 0.4179 | MIEAGQVNEVREFFNQKDFDYDYTRGIRRAIGVPEFDEFFRAESQGVTDGRTMKKILEVATDALKVNNCKLASKQVKKIHRLYGIWKKNMHRLDATEVVLKEDNWEDRVLAKSLRIVHKFLYEDGGNGGCIEPAKIPIVAGFSHVLICPKREVKRFLDLTAEETSDLWLTAQKVGRQLESYHKASSLNLAIQDGPQAGQTVPHVNIHVVPRKGGDFEKNDEIYDAMDEKEKELKEKLDLDKERKDTSAEEMSQEAEEYRKLFL | 263 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa6g03171 | 263 | Gene3D | - | 134 | 263 | IPR036265 | - | |
Vifa6g03171 | 263 | FunFam | Fragile histidine triad | 134 | 263 | - | - | |
Vifa6g03171 | 263 | MobiDBLite | consensus disorder prediction | 234 | 255 | - | - | |
Vifa6g03171 | 263 | Pfam | HIT domain | 144 | 212 | IPR011146 | GO:0003824 | |
Vifa6g03171 | 263 | Gene3D | - | 91 | 121 | IPR027417 | - | |
Vifa6g03171 | 263 | Gene3D | Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 1 | 90 | - | - | |
Vifa6g03171 | 263 | ProSiteProfiles | HIT domain profile. | 144 | 218 | IPR011146 | GO:0003824 | |
Vifa6g03171 | 263 | PANTHER | BIS(5'-ADENOSYL)-TRIPHOSPHATASE | 143 | 262 | - | - | |
Vifa6g03171 | 263 | Coils | Coil | 219 | 261 | - | - | |
Vifa6g03171 | 263 | SUPERFAMILY | HIT-like | 144 | 262 | IPR036265 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa6g03171 | Vifa-Chr6 | 1047879103 | 1047880557 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa6g03171 | 1 | 121 | C2H2 Transcription Factor Family | AT2G27760 | 29.054 | 1.88e-10 | 58.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa6g03171 | K01522 | - | gmx:100305764 | 206.838 |