Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03144 ATGAATCCGCATCACCAGATTGCTTCTGAGATTCAAGACATCAAGTTATCACTTGGTAGAATCAAAGAAAGAAGTACAAGATTCGAGTTTCTGTCTGAAAATGAAGCAGGAAGGACTAAAGCTCCTAGAATTGGTGACCCTCGAATGGCTCCGTATTTCATTGAAGAGACTCAAGTTATAGGATTTGAGTCCGCGCGAGATGAATTGGTCAGATGCTTGGTGGAGGAAAACAATGAGCTCATGTTGGTTGCTGTGGTTGGCATGGGAGGACTCGGGAAAACTACTCTCACAAAGCATGTTTTTGATAGCCAGCTAGTGAAAAAGAACTTTGATTGTAGATCTTTTATCACTGTTTCGCAATCGTACACCATCAGAGAGCTGTTGACAGAAATGATAAAGAAATTTTGCAAGGACAGCAACGAGCCTATTCCAAGGGGTCTGCAGAATATGGATGATGAAACTTTGATTAATCAAGTGAGACAATACCTTGAGTCAAAAAGGTACTTGGTTTTATTTGATGATGTCTGGAAAGATAATTTTTCTGATGGGATTGAACATGCCTTAATTAGTAATAACAAAGGAAGTAGAATCATTGTGACTACTAGAAAAATGCATGTAGCTGATTATTTTAGGAAATATTTTCCTATTCATGTCCATGAGCTACAACGTTTGCCTCCAGACAAAGCATGGGAGCTGTTTTGCAACAAGACGTTTAGAGGGCACTGTCCAACAGAACTTGAGGAGCTGTCCAGAGAAATTGTTCAAAAATGTGGATGGCTACCATTAGCTATTGTGGCCATCAGTGGTCTTTTGTTAACAAATTATAAGAAAACAAAGTATAATGCACACATCTTGAGAGAGAAATGTTAG 870 0.3897 MNPHHQIASEIQDIKLSLGRIKERSTRFEFLSENEAGRTKAPRIGDPRMAPYFIEETQVIGFESARDELVRCLVEENNELMLVAVVGMGGLGKTTLTKHVFDSQLVKKNFDCRSFITVSQSYTIRELLTEMIKKFCKDSNEPIPRGLQNMDDETLINQVRQYLESKRYLVLFDDVWKDNFSDGIEHALISNNKGSRIIVTTRKMHVADYFRKYFPIHVHELQRLPPDKAWELFCNKTFRGHCPTELEELSREIVQKCGWLPLAIVAISGLLLTNYKKTKYNAHILREKC 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03144 289 PANTHER DISEASE RESISTANCE PROTEIN RP 8 276 IPR044974 GO:0006952
Vifa6g03144 289 Gene3D - 50 214 IPR027417 -
Vifa6g03144 289 PRINTS Disease resistance protein signature 82 97 - -
Vifa6g03144 289 PRINTS Disease resistance protein signature 257 271 - -
Vifa6g03144 289 PRINTS Disease resistance protein signature 162 176 - -
Vifa6g03144 289 FunFam Probable disease resistance protein At1g61300 46 212 - -
Vifa6g03144 289 Pfam NB-ARC domain 66 276 IPR002182 GO:0043531
Vifa6g03144 289 Gene3D - 224 288 IPR042197 -
Vifa6g03144 289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 273 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03144 Vifa-Chr6 1040893426 1040894295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03144 60 264 WRKY Transcription Factor Family AT5G45050 26.190 7.43e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03144 K13457 - vun:114181831 356.295