Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03131 ATGGATTTGTATTTTGTAAACCCTCATCCTAATCCCAATTTTGGTTACTCTACTCATATGAACCATGTTCCTTCTTCCTCTTCTCATGAGTTTATACTATCTGAATATCTCATGCTTGATGATATTTGTATTGATCATCATGATCAAGAATCTAGGTCACAAAGTATTGAATCATTAGAGAAAGTAACCTTCAATGATGTCAATCAAGAAGAATTCAATGATGCAACCTCTAATAACAATAACTTAAAGAACAAAAATGGGATTAAAGGAAAAAAAGGAGAAGTGGGGCCAAAGATAGCATTTAGAACAAGATCAGAGATTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGTCTGTCAAGAACAATCACAACCTAAGGAACTACTACAAATGTTCAAGTGTTGGATGCAATGTGAAGAAAAGAGTGGAAAGGGATAGAGATGACTCAAGCTATGTGATAACAACTTATGAAGGTGTTCACAACCATGACATTCCATTTACCTCCTACTGCGGCCAATTTTCCTTTCAACATTCTAATGCATAA 558 0.3477 MDLYFVNPHPNPNFGYSTHMNHVPSSSSHEFILSEYLMLDDICIDHHDQESRSQSIESLEKVTFNDVNQEEFNDATSNNNNLKNKNGIKGKKGEVGPKIAFRTRSEIEIMDDGYKWRKYGKKSVKNNHNLRNYYKCSSVGCNVKKRVERDRDDSSYVITTYEGVHNHDIPFTSYCGQFSFQHSNA 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03131 185 Coils Coil 65 85 - -
Vifa6g03131 185 SUPERFAMILY WRKY DNA-binding domain 102 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa6g03131 185 FunFam WRKY transcription factor 57 96 170 - -
Vifa6g03131 185 Gene3D WRKY domain 95 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vifa6g03131 185 ProSiteProfiles WRKY domain profile. 105 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa6g03131 185 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 19 172 IPR044810 GO:0003700
Vifa6g03131 185 SMART WRKY_cls 110 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vifa6g03131 185 Pfam WRKY DNA -binding domain 111 168 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03131 Vifa-Chr6 1038564965 1038565717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03131 6 168 WRKY Transcription Factor Family AT5G64810 44.848 5.18e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vifa6g03131 WRKY 9.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03131 - - tpra:123913985 249.595