Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03084 ATGGCGCTCTCGTTCTCACTCTCCTCAGGCGTAACCGTTTCTAACCGTTTTCACTCTACTTGTATTTTGAAACCGAATGGGAAGAGTTGTAATGGGTCCAATAAGGTGTTATGTTCTGCGCGGAAGGATAAGACTCCGTTAGTTAGAATAGGTTTAGGGATTGTAGCGGCTTGGGTTATGGGTTTAACGGCGTTGGATGCGGATGCGACTAGAATTGAATACTATGCTACTGTGGCAGAGCCAATGTGTGAGCTCAATTACGCTAAGTCTGGGCTTGGTTACTGCGATGTTGTCGAGGGTTTTGGCGATGAAGCTCCTCTCGGAGAGCTTATCAATATTCATTATACTGCGAGATTCGCAGATGGAATTGTATTTGATAGTAGTTATAAACGTGCTCGACCTCTCACTATGCGGATTGGTGTTGGGAAGGTAATTAGGGGATTGGATCAGGGAATTTTGGGAGGGGAAGGAGTACCTCCAATGCGTATAGGTGGGAAACGCAAGCTAATGATTCCTCCATTGTTAGCTTATGGACCTGAACCTGCAGGGTGTTTCTCAGGTGACTGCAATATACCCGGCAATGCCACTCTTCTATATGACATTAAATTTGTTGGTCTTTATTCGGGCAATGCAAAGTGA 639 0.4523 MALSFSLSSGVTVSNRFHSTCILKPNGKSCNGSNKVLCSARKDKTPLVRIGLGIVAAWVMGLTALDADATRIEYYATVAEPMCELNYAKSGLGYCDVVEGFGDEAPLGELINIHYTARFADGIVFDSSYKRARPLTMRIGVGKVIRGLDQGILGGEGVPPMRIGGKRKLMIPPLLAYGPEPAGCFSGDCNIPGNATLLYDIKFVGLYSGNAK 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03084 212 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 29 212 IPR044183 GO:0009507
Vifa6g03084 212 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 108 207 IPR001179 GO:0003755
Vifa6g03084 212 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 105 203 IPR001179 GO:0003755
Vifa6g03084 212 FunFam Peptidylprolyl isomerase 80 206 - -
Vifa6g03084 212 Gene3D - 80 206 IPR046357 GO:0003755
Vifa6g03084 212 SUPERFAMILY FKBP-like 87 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03084 89 208 Calmodulin-binding Proteins AT3G25230 37.705 1.71e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03084 K01802 - gmx:100500547 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g03084 6 1022660080 1022661527 Vifa6g03084 6 1022660080 1022661527 ECH