Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g03078 ATGAGTGGTCCAATTTGGTTCTGCTTAGTAGCTTCTGAAAACCAGGAAGGAGATGCACCCTTGCCACAAATTCCTGCTAGCTATCTGAGAATAAAGGATGGAAGCGTACCTGTCTCTGAAACTGAGATTGAGATTAAATGTATGGGACAACCAGTGCTCCCTACTCTGAAACTACATAGTTTGGTTGAGTTGTGGCTGGATTCTGCAGCATCCGCATCAGACCGAATTCCGGCGATTATAGGGTCCTCAGCAAAGGATTTTGTCATGGTTCTAGCATATGCTCGGAAGACTCCACACCCTTGA 303 0.4587 MSGPIWFCLVASENQEGDAPLPQIPASYLRIKDGSVPVSETEIEIKCMGQPVLPTLKLHSLVELWLDSAASASDRIPAIIGSSAKDFVMVLAYARKTPHP 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g03078 100 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 3 97 IPR044807 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g03078 Vifa-Chr6 1020548048 1020549735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g03078 2 32 C3H Transcription Factor Family AT2G30580 70.968 1.12e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g03078 K16277 - gmx:100793731 156.762