Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa6g03053 | ATGTTAACAGCTATAGATATATACAATGAAGAACTCATGAAAGCACTAGAGCCTTTTATGAAAACTGGTTCTTCTTCATCAATCTCTGAACAACAATCACATGATTTGAATCCCAATTACGTAACCCAAAGAAGCTCTATTGGTCTCAACCAACTCACCCCATCACAAATCCTTCAAATCCAAAACCAGTTCCAAATCTCCCAACAACAACAAAAAAGCACTCTCACACAAAAGCCCGTTCCCATGAAGCACTTTGGAGCTTCCTCAAAACCCACGAAACTCTATCGTGGAGTTAGACAGCGTCATTGGGGAAAATGGGTTGCTGAAATAAGACTTCCAAAGAACCGCACTCGTCTCTGGTTAGGCACGTTCGATACCGCAGAGGAAGCAGCTTTTGCTTATGACATCGCAGCTTATAAGCTTAGAGGCGAATTCGCACGCCTGAACTTTCCTCATATGCGCTTCCATGGAAACTACAATCCTCTCGCTTCTTCTGTCGATTCCAAACTCCAAGCTATTTGTGAATCCTTAGCTGTTTCTCATGGGGACACTGAAAAACCATGCATCTCTGTTGAAGATGTAAAGCCTGTTGTTTTTGTACCTACACAATCCAAGACTGAGTTGGTTTTTCACGAGTTTGAGGATTTTAAGGTTGAGAATGAGAAGACAGTGTTGTTGTCTATGTCTGATGAATGTTCACCTGGTTTGTCTTCTCCAGAATCCGGTGTAACTTTCTTGGATTTTTCAGATTCTTGTCGGTGGGATGAAGTGGAGAATTCGGGGTTGAAGAAGTACCCTTCTGTTGAAATTGATTGGGAAGCATTATGA | 828 | 0.4191 | MLTAIDIYNEELMKALEPFMKTGSSSSISEQQSHDLNPNYVTQRSSIGLNQLTPSQILQIQNQFQISQQQQKSTLTQKPVPMKHFGASSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAFAYDIAAYKLRGEFARLNFPHMRFHGNYNPLASSVDSKLQAICESLAVSHGDTEKPCISVEDVKPVVFVPTQSKTELVFHEFEDFKVENEKTVLLSMSDECSPGLSSPESGVTFLDFSDSCRWDEVENSGLKKYPSVEIDWEAL | 275 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa6g03053 | 275 | ProSiteProfiles | AP2/ERF domain profile. | 94 | 151 | IPR001471 | GO:0003700|GO:0006355 | |
Vifa6g03053 | 275 | Gene3D | AP2/ERF domain | 94 | 153 | IPR036955 | GO:0003700|GO:0006355 | |
Vifa6g03053 | 275 | SUPERFAMILY | DNA-binding domain | 94 | 152 | IPR016177 | GO:0003677 | |
Vifa6g03053 | 275 | CDD | AP2 | 93 | 152 | IPR001471 | GO:0003700|GO:0006355 | |
Vifa6g03053 | 275 | PRINTS | Ethylene responsive element binding protein signature | 117 | 133 | IPR001471 | GO:0003700|GO:0006355 | |
Vifa6g03053 | 275 | PRINTS | Ethylene responsive element binding protein signature | 95 | 106 | IPR001471 | GO:0003700|GO:0006355 | |
Vifa6g03053 | 275 | SMART | rav1_2 | 94 | 157 | IPR001471 | GO:0003700|GO:0006355 | |
Vifa6g03053 | 275 | Pfam | AP2 domain | 95 | 144 | IPR001471 | GO:0003700|GO:0006355 | |
Vifa6g03053 | 275 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 | 11 | 275 | - | - | |
Vifa6g03053 | 275 | FunFam | Ethylene-responsive transcription factor 2 | 93 | 152 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa6g03053 | Vifa-Chr6 | 1014115578 | 1014116405 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa6g03053 | 2 | 275 | AP2-EREBP Transcription Factor Family | AT4G39780 | 52.542 | 7.35e-85 | 253 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Vifa6g03053 | AP2 | 1.5e-13 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa6g03053 | K09286 | - | gmx:100818839 | 290.426 |