LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa6g03015	ATGTTACTCACTCATCACATTCATCTCCCTTTCACACATTCACTCTTCACCACCCCCTTCCGCCCCTTGCACCTCACCACTCCAATTCTCAACCTCAAACTCCCATCCACACCCCCCAGGTTTACTTCCTTCACCCTCCACGCCGACCGCCAACCCCAGACCTCTATCCCCAACCACGTCGTCGCCAATTCCATCTCCGATTCCGTCATCGACTCCTTCCTTTCGCTTCTCGAATTCCTGTGCCTTCTCTCGTCGCTCATCGTGTCGGCTAACGTCGCCGTGATTGCGCTGTGGAAGAAGGAGTTGTATGAAGCGATTGGGAACAGAGTTGCTCCGTTGAGTATGTTGTTGTTGGTGGTTGGTGTTTTGACCGGCGCGTTGATTAGGAGAAGGAGGGATGTTATGATCGGCGGGGTTCCGGTGTCGAAGGTGAGTTTGTTGCCGAGGATTCAGAAATTGGAAGGGGATTTGGCTAGGTCTGCCAATGTTATTAGGATTTTGTCTAGGCAGCTTGAGAAATTGGGGATGAGGTTTCAGCTCACTCGGAAGAATTTGAAGGAACCCATGTCTGAGACTGCTTCTCTCGCACAGAAGAATTCCAAGGCCGCAACAGTATTAGCCATGCAATCAGACTTGTTGGAGAAAGAGGTCGAGGAAATTCAGAAAGTTTTACTAGCAATGCAGGAACAACAGCAAAAACAACTTGATCTCATTCTTGCAATTGTGAAGCCAAGTAAGCCATGGGAAAGCAAGCAAATTAATGAGGTGAATCAGGAGATCCACCAAATTTGA	792	0.4886	MLLTHHIHLPFTHSLFTTPFRPLHLTTPILNLKLPSTPPRFTSFTLHADRQPQTSIPNHVVANSISDSVIDSFLSLLEFLCLLSSLIVSANVAVIALWKKELYEAIGNRVAPLSMLLLVVGVLTGALIRRRRDVMIGGVPVSKVSLLPRIQKLEGDLARSANVIRILSRQLEKLGMRFQLTRKNLKEPMSETASLAQKNSKAATVLAMQSDLLEKEVEEIQKVLLAMQEQQQKQLDLILAIVKPSKPWESKQINEVNQEIHQI	263

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa6g03015	263	PANTHER	TRANSMEMBRANE PROTEIN	39	258	-	-
	Vifa6g03015	263	Coils	Coil	210	233	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa6g03015	Vifa-Chr6	1000997789	1001000898	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa6g03015	53	249	Eukaryotic Initiation Factors Gene Family	AT5G65250	49.000	4.10e-50	165

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa6g03015	-		-	gmx:100790782	223.016