Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02985 ATGACAACCGTTGGATATGGCGATCTCGTTCCTAATAGTACTATAGCGAAACTACTTGCTTGCCTTTATGTCTACACTGGTATGGCTCTTGGTGGCTTGATTCTTAGCAAAGCAGCAGATTACATTGTTGAAAAACAGGAAGTGTATCTTGTTAAAGCAATATGCAAAGCCGAGAAACTCGGTCTAGAAGAGGTTTCTAAAGAACTTGTGACTAAGAAAAGCAAATACAAGTTTCTGCTTTCAATATCCATTTTTGTTGTACTCATGATTACAGGAACTGTTTTTCTGTATTTTGTTGAGAAACTAGATTTCGTCGATGCATTCTATTGTGTTTGTTCGACGGTTACGACTTTAGGTTACGGAGATAAGAGCTTCTCAACTCCTATTGGTAGGACTTTTGCTGTGTTTTGGATATTAAGCAGCACCATTTGCTTGGCTCAGTGTTTTGCATATCTTGCTGATTTTTATACGGAAGATAGACAAAGATCATTGGCGAAAATGGTTCTCACGCGAAATTTGTATATGCATCATTCACTGGGATTGTATACTTTTCTTAATTTGTCGCGTATAATCAACGACGACAACAACAACACCAACACAGACATGTCTATAGCAGCGACCTCCTCACAAAATCATCAATTGTAA 645 0.3798 MTTVGYGDLVPNSTIAKLLACLYVYTGMALGGLILSKAADYIVEKQEVYLVKAICKAEKLGLEEVSKELVTKKSKYKFLLSISIFVVLMITGTVFLYFVEKLDFVDAFYCVCSTVTTLGYGDKSFSTPIGRTFAVFWILSSTICLAQCFAYLADFYTEDRQRSLAKMVLTRNLYMHHSLGLYTFLNLSRIINDDNNNTNTDMSIAATSSQNHQL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02985 214 Pfam Ion channel 1 43 IPR013099 -
Vifa6g02985 214 Pfam Ion channel 84 157 IPR013099 -
Vifa6g02985 214 SUPERFAMILY Voltage-gated potassium channels 71 182 - -
Vifa6g02985 214 Gene3D - 59 163 - -
Vifa6g02985 214 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 1 172 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vifa6g02985 214 Gene3D - 1 48 - -
Vifa6g02985 214 SUPERFAMILY Voltage-gated potassium channels 1 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02985 Vifa-Chr6 987311690 987312334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02985 1 173 Ion Channels AT5G55630 58.960 9.46e-68 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02985 K05389 - gmx:100799492 272.322