Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02976 ATGTCGAAACCCTGGGGGAATATCGGAGCTTGGGCCGCCGATTCCGAGCGCGCCGAAGCCGAAGAACGCGAAGCCGCTGCTGAGGCTGCCACTGCCGGGTCGGCTAACTTCCCGAGTCTCAGGGAAGCCGTGACTGCTAAGCCGAAGAAGAATAAGAAGATGTCGCTTTCTGAGTTCACCGGAGGCGGTTACGCTTCCGGTGGTAGTGCCGCTGCTTATCCTCGTTTGACGCCGGATGAGATGCTTCGTCTTCCGACCGGGCCTAAGGAACGTTCCGCTGAGGAAATGCAGTTTAACCGTCTCGGTGGTGGTTTCTCCTCTTTTGATCGTTCGGGCCGTGGTCGAGATCGTGAGGGAGGCTCTGGAGATGCTTCGTGGGGTGCTGGGAGAAGATCTTATGGTGGATTTGATGATGAACGCAGGGCACCGAGTTCTAGGGTTTCGGAAATGGATCAACATTCGAGGGCTGACGAGGTGGATAATTGGGCTTCGGTGAAAAAGCCACTTCCCTCATTTGATTCAGGCCGGCAAAATCGATACGGTGGTTTTGGTGGTGAATCTAAGGCTGATGGAGTGGACAATTGGGCGGTTGGTAAAAAGCCTATTCCTGTCAGGTCTTCTGATTATCGTGATTCTGGCATGAATACAGATCGCTGGTCCAGGGGTTCTGCTGTGGAACCAGATCGCTGGTCCAGGGGTTCTGCTGTGGAACCAGATCGCTGGTCCAGGGGAGCACCGCGTGATATGGAGCAGCAGCGGCCAAGGTTGGTGTTGGATCCAAAGAAAGGTGATGGTTCTGTGAATGAGGCTCCTGTGAAGACAAATAAGCCGAATCCATTCGGTGCGGCAAGACCTAGGGAGGAAGTGTTGGCTGAGAAAGGATATGATTGGAAGAAGCTCGATTCTGAGATTGAGGCAAAGAAGACGAGTAGGCCTTCGAGTTCACATTCCAGCAGACCTTCAAGTGCTCAGTCAAATCGCTCTGAAGGTCCAGACGCAGCGCTGAAGCCGAGGCCAAAGGTTAATCCCTTTGGAGATGCCAAGCCAAGAGAGGTTTTGCTTAGCGAGCGTGGCAAGGATTGGAGGAAGATTGATCTTGAATTGGAGCATCGCGCCGTTGATAGGCTTGAGACCGTTGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAGGAAATTGAGAAGGAGTCTTCAATAAGTTCAAATAAGGAAGTGGATGATGCTGCTGGAGGCCAAACTGGTACACGGGCAATGCTACTAGAGAAAGAAAAGGAGCTGGAACTACTTATCCGTGATTTGGATGATAAAGTTCGTTTTGGGCAGAAAGCTGTGGAAAGGCCAGGTTCGTCATCAGGAAAGTCTGCTGGTTTTCCTGATCGGCCACCATCTCGTTCTGGCTCATTTGAGGATTCTAGAAGTGTGGATTTTTCGGACCGACCCCGTTCCCGTGGCACAGGAGATATGTCGATGCGTCCTACCGATGACAGAAGACAATTTCAGGGTAGCAAGGACAGGGGGTGGTTTTCAAACAGCAGTGACTTGAATAAGCCACGGTCCAGAGACAGATGGTGA 1575 0.5137 MSKPWGNIGAWAADSERAEAEEREAAAEAATAGSANFPSLREAVTAKPKKNKKMSLSEFTGGGYASGGSAAAYPRLTPDEMLRLPTGPKERSAEEMQFNRLGGGFSSFDRSGRGRDREGGSGDASWGAGRRSYGGFDDERRAPSSRVSEMDQHSRADEVDNWASVKKPLPSFDSGRQNRYGGFGGESKADGVDNWAVGKKPIPVRSSDYRDSGMNTDRWSRGSAVEPDRWSRGSAVEPDRWSRGAPRDMEQQRPRLVLDPKKGDGSVNEAPVKTNKPNPFGAARPREEVLAEKGYDWKKLDSEIEAKKTSRPSSSHSSRPSSAQSNRSEGPDAALKPRPKVNPFGDAKPREVLLSERGKDWRKIDLELEHRAVDRLETVEEKLLKEEIDNLKEIEKESSISSNKEVDDAAGGQTGTRAMLLEKEKELELLIRDLDDKVRFGQKAVERPGSSSGKSAGFPDRPPSRSGSFEDSRSVDFSDRPRSRGTGDMSMRPTDDRRQFQGSKDRGWFSNSSDLNKPRSRDRW 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02976 524 MobiDBLite consensus disorder prediction 442 524 - -
Vifa6g02976 524 MobiDBLite consensus disorder prediction 232 262 - -
Vifa6g02976 524 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 524 IPR010433 GO:0003743
Vifa6g02976 524 MobiDBLite consensus disorder prediction 393 418 - -
Vifa6g02976 524 MobiDBLite consensus disorder prediction 133 162 - -
Vifa6g02976 524 Pfam Plant specific eukaryotic initiation factor 4B 1 228 IPR010433 GO:0003743
Vifa6g02976 524 Pfam Plant specific eukaryotic initiation factor 4B 232 507 IPR010433 GO:0003743
Vifa6g02976 524 Coils Coil 417 437 - -
Vifa6g02976 524 MobiDBLite consensus disorder prediction 303 351 - -
Vifa6g02976 524 MobiDBLite consensus disorder prediction 1 288 - -
Vifa6g02976 524 MobiDBLite consensus disorder prediction 313 329 - -
Vifa6g02976 524 MobiDBLite consensus disorder prediction 472 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02976 Vifa-Chr6 983963468 983969468 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02976 1 513 Eukaryotic Initiation Factors Gene Family AT3G26400 51.071 1.62e-142 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02976 - - gmx:100784238 626.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g02976 6 983963468 983969468 Vifa6g02976 6 983963468 983969468 ECH