Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02932 ATGTTTGGCGGGGCTTTGAATTCCGAAGCAATAATGGAAAAGAACACATTTGGAGCACATTTAGTGGCGTTGTGTTTCTTTGGGATGCTTCTAATGCATTCTTCTTGTCAAAATGATTCAACTACTGATGTGTACATTGTTACTCTCAGACAAGCCCCTACTTCTCACTATCAGAATGAGTTGACCACAGCTTATAACAACTTCAGACATGGTACTTTTAGGAGAACCGCACTTCACAATCCAAGACATCAAAATTTTACAAAGACATATAAGAGACGTGGTTCTAACATCGCACAAGTTCACGATTCATTGTTGAAGAAGGTGTTTAAAGGAGAGAAGTATCTGAAACTCTATAGCTATCATTACTTGATCAATGGATTTTCTGTGCTTGTTACTCAACAGCAGGCAGAGAAGCTATCAAGGAGAAGAGAAGTGTCCAATGTGGTTTCAGATTTTTCTGTAAGAACTGCAACCACGCATACCCCGGAGTTTTTGGGTCTGCCACAGGGAGCTTGGCTTCAATCAGGTGGATTTGAAACTTCCGGAGAAGGAATCACTATTGCGTTTGTTGACACAGGCATTGATCCTACACACCCTAGTTTCACTGATGATAAATCTGAACATCCATTTCATCCTCCTCCTCGTTTTTCTGGCACCTGCGAGATTACTCCAGATTTTCCATCTGGTTCTTGCAATAGGAAGCTTGTTGGCGCCCGTCATTTTGCAGCATCTGCTATAATCAGAGAAATGCTTGATCCAACTGAGGACTATGCTTCTCCCTTCGACGGTGATGGCCATGGCACGAACACAGCTTCTATTGCAGCTGGAAACCATGGAATTCCAGTGGTTGTTAATGGGTATCATTTCGGAAATGCTAGTGGGATGGCTCCTCGTTCGCAAATTGCTGTTTACAAGGCACTATACAAGGGATTTGGAGGATTTGCTGCAGATGTTGTTGCAGCTATTGATCAGGCAGCTCAAGATAGAGTTGATATAATATGCTTGTCAATCACTCCTAATAGGCGTCCTCCCGGTATTGCAACTTTCTTCAATCCGATAGACATGGCATTGTTGTCAGCTACAAAGGCTGGTATTTTTGTTGTGCAAGCTGCTGGAAATACTGGACCTTCGGCTATGAGCATGTCCTCCTTTAGCCCATGGATCTTTACTATTGGTGCCACCTCTCATGATCGAGTTTATAGCAACTCGCTATCTCTTGGAAATAATGTGACTATACTCGGAGTTGGACTTGCACCTGGCACGTCTGAGAACACAATATTCAACATCAAGCAGGCCGTAGAAACAGCCACAAATCTTAGTGCTGCCGGGGTTGTTTTTCCCATGAATCCTTCTGTGAATGGTTTTCAGCTTAATCCAACTCCAATGAAAATTCCTGGCATAATAATTCCATTTGCAAATGATTCCAAGATATTATTAGAATACTACAATTCTTCACTTGAAAAAGACGGTACTTCAGAAAAAATTGTTAAACTTGGGGCTGTTGCTAGCATCAATGGTGGACTTACGGCGAGCTATAACAATGTTGCCCCAAATGTTATGTATTACTCTGCCAGAGGACCAGATCCAGAGGACAATTTTCCTCATGAAGCTGACATTTTGAAACCCAATCTTGTAGCCCCTGGAAGTTTTATATGGGCTGCTTGGAGTTCTGTTGCCACTGATTCAGACGAGTTTCTAGGTGAGAATTTTGCAATGTTGTCTGGCACAAGCATGGCTGCACCTCATGTTGCTGGTCTTGCTGCACTAGTCAAGCAAAAGTTTCCCAATTTCAGCCCTGCAGCCATTGGATCTGCGCTTTCCACCACAGCATCGCTCGGGTTTGTGAACGCTACTGCAGCTTTAAACCCGGGATTGCTTTTCGAATCAAGTTATGATGATTACATGTCTTTTCTATGTGGTATGAATGGTACAGCTTCTGTAGTTCTCGACTACACTGGTCAGAATTGTTTGATTTATAACTCTACTGGCTATGGCTCTGATCTAAACTTGCCTTCAATCACAATAGCGAGGTTGAACCAATCTAGAATAGTGCAGAGAACAGTACAAAACATTGCTGGAAATGAAACTTACAATGTTGGTTGGAGTTCTCCATACGGAGTTTCAGTTAAAGTATATCCAACTCGCTTCTCTCTAGCCAATGGGGAGAGACAAATCTTATCTGTGATCTTCAATGCAACCAGCAACAGCTCTATTGCAAGCTTTGGAAGGATTGGATTGTTTGGTAATCAAGGTCATGTAGTCAACATTCCTGTGTCTGTCATTGTTAAAATCTCACTATGA 2301 0.4233 MFGGALNSEAIMEKNTFGAHLVALCFFGMLLMHSSCQNDSTTDVYIVTLRQAPTSHYQNELTTAYNNFRHGTFRRTALHNPRHQNFTKTYKRRGSNIAQVHDSLLKKVFKGEKYLKLYSYHYLINGFSVLVTQQQAEKLSRRREVSNVVSDFSVRTATTHTPEFLGLPQGAWLQSGGFETSGEGITIAFVDTGIDPTHPSFTDDKSEHPFHPPPRFSGTCEITPDFPSGSCNRKLVGARHFAASAIIREMLDPTEDYASPFDGDGHGTNTASIAAGNHGIPVVVNGYHFGNASGMAPRSQIAVYKALYKGFGGFAADVVAAIDQAAQDRVDIICLSITPNRRPPGIATFFNPIDMALLSATKAGIFVVQAAGNTGPSAMSMSSFSPWIFTIGATSHDRVYSNSLSLGNNVTILGVGLAPGTSENTIFNIKQAVETATNLSAAGVVFPMNPSVNGFQLNPTPMKIPGIIIPFANDSKILLEYYNSSLEKDGTSEKIVKLGAVASINGGLTASYNNVAPNVMYYSARGPDPEDNFPHEADILKPNLVAPGSFIWAAWSSVATDSDEFLGENFAMLSGTSMAAPHVAGLAALVKQKFPNFSPAAIGSALSTTASLGFVNATAALNPGLLFESSYDDYMSFLCGMNGTASVVLDYTGQNCLIYNSTGYGSDLNLPSITIARLNQSRIVQRTVQNIAGNETYNVGWSSPYGVSVKVYPTRFSLANGERQILSVIFNATSNSSIASFGRIGLFGNQGHVVNIPVSVIVKISL 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02932 766 CDD Peptidases_S8_3 157 611 IPR034197 -
Vifa6g02932 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 575 585 IPR023828 -
Vifa6g02932 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 110 759 IPR045051 -
Vifa6g02932 766 Pfam Peptidase inhibitor I9 44 157 IPR010259 -
Vifa6g02932 766 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 187 198 IPR023827 -
Vifa6g02932 766 Gene3D - 638 762 - -
Vifa6g02932 766 Gene3D Peptidase S8/S53 domain 467 637 IPR036852 GO:0004252|GO:0006508
Vifa6g02932 766 Gene3D Peptidase S8/S53 domain 184 396 IPR036852 GO:0004252|GO:0006508
Vifa6g02932 766 Gene3D - 397 433 - -
Vifa6g02932 766 SUPERFAMILY Subtilisin-like 94 648 IPR036852 GO:0004252|GO:0006508
Vifa6g02932 766 Pfam Fibronectin type-III domain 667 760 IPR041469 -
Vifa6g02932 766 Pfam Subtilase family 182 610 IPR000209 GO:0006508|GO:0008236
Vifa6g02932 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 31 156 IPR037045 -
Vifa6g02932 766 ProSiteProfiles Serine proteases, subtilase domain profile. 162 632 - -
Vifa6g02932 766 PRINTS Subtilisin serine protease family (S8) signature 182 201 IPR015500 -
Vifa6g02932 766 PRINTS Subtilisin serine protease family (S8) signature 574 590 IPR015500 -
Vifa6g02932 766 PRINTS Subtilisin serine protease family (S8) signature 262 275 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02932 Vifa-Chr6 972378084 972381728 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02932 39 765 Subtilisin-like Serine Gene Family AT4G20430 58.902 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02932 - - gmx:100814065 1163.67