Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02930 ATGAGACTCTACTCAGCTGCACCAGGTGCATTCAGAGAGGCGAAAACCAATATCACCTATGAAGACTTTACAATTCCAAAAGGTTGGAAGATATTTTGGGCATTTATTGGAACAAACAAGAATCCGATATACTTTGATGAGCCGGAAAGTTTTGATCCATCAAGATTTGAAGGGAATAATGTGCATGCACCATATTGTTATATACCATTTGGAGCAGGACCAAGATCTTGTCCTGGAAAGGACTATACCCGATTTGTGATTCTCACTTTCATTCACAATCTTGTAACAAAGTTCAAAGGGGATGTTATGATTCCTGATGAGAAAGTGTCTGGTACTTTGGTACCTATCCCAGCTGAGGGAGTTCCTATCCGTCTTTATAAGTTGTAA 387 0.3953 MRLYSAAPGAFREAKTNITYEDFTIPKGWKIFWAFIGTNKNPIYFDEPESFDPSRFEGNNVHAPYCYIPFGAGPRSCPGKDYTRFVILTFIHNLVTKFKGDVMIPDEKVSGTLVPIPAEGVPIRLYKL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02930 128 PANTHER CYTOCHROME P450 26 1 100 - -
Vifa6g02930 128 Gene3D Cytochrome P450 1 126 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02930 128 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 70 79 IPR017972 GO:0005506|GO:0016705
Vifa6g02930 128 PRINTS E-class P450 group I signature 77 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02930 128 PRINTS E-class P450 group I signature 67 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02930 128 PRINTS E-class P450 group I signature 34 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02930 128 SUPERFAMILY Cytochrome P450 1 126 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02930 128 Pfam Cytochrome P450 1 102 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02930 Vifa-Chr6 971412546 971413046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02930 1 122 Cytochrome P450 AT3G19270 40.164 9.89e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02930 K20667 - tpra:123917065 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g02930 6 971412546 971413046 Vifa6g02930 6 971412546 971413046 ECH