Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02914 ATGGATCATAGTCAAGGTGGTGGCGAAAACGTTCCACAAAAGTCTCAAAAGGAACATGAAAATTATAACAAAGAAACAGTTTTCTTACATGGTGACTTAGATTTATTGATCATAGAAGCAAAATCTCTTCCGAATCTAGATTTATCAACTGAAGCAGTTAGGAAATGTCTCACTATGGGAAATAGTTGCTCACCGCCTTTTGTGAAAGGACTCAAAACACACTCAGGAAAAGATAAGATCATAACAAGTGATCCTTATGTATCTGTTTGTTTAGCCACTGCAACTATAGCGCAAACAAGAGTCATTCCGAATTGCGAAAACCCTTTATGGGATGAACATTATACTGTTCCTGTTGCTCATCCTGTTCAGAAAGTTGAGTTTTTAGTAAAAGATAATGATATTCTTGGTGCTGAACTTATTGGAGTTGTGGACATACCTGTTCAGAAGATACTTTCTGGTAACACTGTTAATGATTGGTTTCCGATTATTGGTCAATATGGAAGCTGCTTAAAACCTTATCCTGAATTGCATATTTCAATTCAGTATAAGCCAATTGGTAGTGGTAACGAGAAAAAGAGAGGTGTTGATTACGGTGTTCCTGATTCATATTTTCCGCTTAGGAAAGGCGGGCATGTCACGCTTTATCAAGATGCGCATGTACCGGACGGTATGCTACCGCAAATTGAACTTGAAGATGGAAAATTTTTTCAGCATAGTAAATGTTGGGAGGATATTTGTCACGCGATTTTGGAAGCTCATCATATGATATATATTATTGGATGGTCAATTTTTCATCCTGTGAAGCTTGTTCGCGAGCCTACGAAACCTTTGCCTTCGGGTGGAGAGCTTTCACTTGGAGAGTTGTTGAAGTACAAGTCACAAGAAGGGTTAAGAGTTGTTATGCTGATTTGGGATGATAGAACTTCACATGACAAGTTTCTTTTGAAAACAGATGGTGTTATGCAGACTCATGATGAAGAAACTAAAAAGTTTTTTAAACATTCAACAGTTCATTGTGTATTATCTCCACGTTATGCAAGCAATAAACTCAGTATTTTCAAGCAACAGGTTGTTGGAACCCTCTTTACGCATCACCAGAAATGTGTGCTTTTAGACACTCAAGGTTCTGGCAATAATCGCAAAATAACCGCATTTCTCGGTGGTCTAGATCTATGTGATGGCAGATATGATACACCTGAGCATAGAATTTTTCATGATCTTGATACCGTCTTTCAAAATGATTATCATAATCCTACATTTCAATTAAATTCTAATTCTTCTGCACCAAGGCAACCATGGCATGACTTACATTGCAAAATTGAAGGTCCGGCTGCATATGATATACTGACCAATTTTGAACAAAGATCACGGAAGGCTAAAAAATGGCGCGATTTCAGACTCCGAAAGGTGACGAATTGGCATGACGATGCTTTGCTAAGGCTAGACCGTATTTCGTGGATTGTCAAACCATCTTCTGGTCCTGATGGTGATAAATGCGTTCATGTAACCGAAGAATCTGATCCTGAGAGTTGGCACGTACAGGTATTTCGGTCCATAGATTCAGGATCCGTGAAGGGATTTCCAAAGGATTTCGACAAAGCAAAGGCTCAGCATCTTCTGTGTGGCAAAAATTTAAAAGTTGATCAAAGCATTCATGCGGCTTACATAAAAGCAATAAGATTGGCTCAACGCTTCATTTATATCGAGAATCAATATTTTCTTGGCTCTTCATATCATTGGCCTTCATATAAAAATGCAGGCGCAAATCACTTGGTTCCGATGGAGATAGCATTAAAAATTGCGAGCAAGATAAGTGCGAACGAGCGATTTTCTGTTTATATAGTTATACCAATGTGGCCAGAAGGAGTACCAACTAGTGCTGCTGTTCAAGAAATCTTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAAGATTGTTGCAGATGCACTTGCAAAAGCAGGTCTCTCTGAATGTTACCATCCCCAAGATTATCTAAATTTTTATTGTCTTGGAAAGAGAGAACCTCAATCGTGCGAATCTCCATCAATGCCAACTCAATCGTCTGAAAATCGCGCCTTGGCATCAGTTAAAAAATACAGACGTTTTATGATTTATGTTCATGCAAAAGGAATGATAGTTGATGACGAATATGTAATAATTGGATCCGCAAATATTAATCAGAGATCAATGGATGGATCAAGAGACACGGAAATAGCCATGGGGGCTTATCAACCAAAATATACATTAGCAGAAAACAACTCTCTTCCACGTGGCCAGGTGTACGGATACAGAATGTCACTTTGGGCCGAGCACCTTGGTAGTCTTGATGAGACATTTACTGAACCTCGCACGCTGGAATGTGTACGACTTGTGAATAGAATTGCTAGAAAAAATTGGAGCTCATATGTGTCTGAAGAAGGTCATCATCAAATGAGGGGAAACTTGATGCAATATCCAGTTTATGTTAGCAGAAATGGAAAAGTTAGTTCATTGGAGGGTCATGAGTATTTTCCTGATGTTGGTGGCAAAATTCTTGGAGCACAAAATTCACTTCCGGATGCACTAACCACATGA 2577 0.3896 MDHSQGGGENVPQKSQKEHENYNKETVFLHGDLDLLIIEAKSLPNLDLSTEAVRKCLTMGNSCSPPFVKGLKTHSGKDKIITSDPYVSVCLATATIAQTRVIPNCENPLWDEHYTVPVAHPVQKVEFLVKDNDILGAELIGVVDIPVQKILSGNTVNDWFPIIGQYGSCLKPYPELHISIQYKPIGSGNEKKRGVDYGVPDSYFPLRKGGHVTLYQDAHVPDGMLPQIELEDGKFFQHSKCWEDICHAILEAHHMIYIIGWSIFHPVKLVREPTKPLPSGGELSLGELLKYKSQEGLRVVMLIWDDRTSHDKFLLKTDGVMQTHDEETKKFFKHSTVHCVLSPRYASNKLSIFKQQVVGTLFTHHQKCVLLDTQGSGNNRKITAFLGGLDLCDGRYDTPEHRIFHDLDTVFQNDYHNPTFQLNSNSSAPRQPWHDLHCKIEGPAAYDILTNFEQRSRKAKKWRDFRLRKVTNWHDDALLRLDRISWIVKPSSGPDGDKCVHVTEESDPESWHVQVFRSIDSGSVKGFPKDFDKAKAQHLLCGKNLKVDQSIHAAYIKAIRLAQRFIYIENQYFLGSSYHWPSYKNAGANHLVPMEIALKIASKISANERFSVYIVIPMWPEGVPTSAAVQEILFWQGQTMSMMYKIVADALAKAGLSECYHPQDYLNFYCLGKREPQSCESPSMPTQSSENRALASVKKYRRFMIYVHAKGMIVDDEYVIIGSANINQRSMDGSRDTEIAMGAYQPKYTLAENNSLPRGQVYGYRMSLWAEHLGSLDETFTEPRTLECVRLVNRIARKNWSSYVSEEGHHQMRGNLMQYPVYVSRNGKVSSLEGHEYFPDVGGKILGAQNSLPDALTT 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02914 858 ProSiteProfiles C2 domain profile. 12 160 IPR000008 -
Vifa6g02914 858 Pfam Phospholipase D C terminal 777 848 IPR024632 -
Vifa6g02914 858 Gene3D Endonuclease Chain A 518 753 - -
Vifa6g02914 858 SMART C2_3c 32 159 IPR000008 -
Vifa6g02914 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 703 730 IPR001736 GO:0003824
Vifa6g02914 858 PANTHER PHOSPHOLIPASE D 24 848 IPR015679 -
Vifa6g02914 858 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 29 185 IPR035892 -
Vifa6g02914 858 PIRSF PLD_plant 17 858 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Vifa6g02914 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 360 395 IPR001736 GO:0003824
Vifa6g02914 858 SMART pld_4 703 730 IPR001736 GO:0003824
Vifa6g02914 858 SMART pld_4 360 395 IPR001736 GO:0003824
Vifa6g02914 858 Pfam C2 domain 31 162 IPR000008 -
Vifa6g02914 858 FunFam Phospholipase D delta 232 477 - -
Vifa6g02914 858 SUPERFAMILY Phospholipase D/nuclease 551 782 - -
Vifa6g02914 858 Gene3D C2 domain 27 183 IPR035892 -
Vifa6g02914 858 Gene3D Endonuclease Chain A 231 477 - -
Vifa6g02914 858 SUPERFAMILY Phospholipase D/nuclease 200 464 - -
Vifa6g02914 858 CDD C2_plant_PLD 26 182 - -
Vifa6g02914 858 Pfam PLD-like domain 692 739 IPR025202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02914 Vifa-Chr6 966786366 966789859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02914 25 857 Phospholipase D Gene Family (Wang group) AT2G42010 53.588 0.0 915
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02914 K01115 - gmx:100810824 1460.66