Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02913 ATGGGTAAGAAGAGCAAGGGTCTCTTCACCTTTCGCCGCCGGTCTAAGAAACCCGCCGTGCCATCTCCGTCTCCGCCGCATCCTACGGCGGTCGAAATCACTAGTTCACCGTCGGAGAATCGATTGGTTACAAAAGCTAAGAAAAAAACCGGTGGAGCCAGGCTATGGATGCGGTTCGACCGGTCTGGCCGGTCGGAGCTCGTGGAGTGGGAGAAAAACACGATCATCCGCCATGCCGCAATTCCAGCCAGAGACCTCAGGATTCTTGGCCCTGTCTTCTCCCACTCATCCAATATACTCGCGAGAGATAAAGCGATGGTGGTTAATTTGGAGTTTATAAAAGCAATAGTAACAGCTGAAGAAATTTTATTGCTTGACCCTTTACGTCAGGAGGTTCTTCCGTTTGTTGAACAATTGAGGCTACAGCTTCCACACAAGGCTCAACCAAAACTTCTTGGTGGTGGTGATGAACAAGATTTGCCTGTTCCTGAGGGTGGTGAAGGTTTACCTTCCGAGCTTCTGCTTCCGTTTGAGTTTCAAGTGTTGGAGATTGCTTTGGAAGTTGTGTGTACTTATCTGGATTCGAATGTTGCTGACCTTGAGAGAGGTGCTTATCCTGTGTTGGATGAGTTGGCTAGGAATGTTAGTACCAAGAATCTTGAACATGTTAGAAGCTTGAAGAGTAATCTTACTCGATTGCTTGCACGTGTACAGAAGGTGCGAGATGAAATTGAACATCTGTTAGATGACAATGAAGACATGGCTCAACTATATTTGACAAGGAAGTGGTTGCAAAATCAACAACCTGAGGCTCAGTTAGGAGCTACGACCTCAAATAACCTTTCAATTGTTCGACGACTTAATTCTACCAGAAGTGGAAGTGTTGTGACTAGCAACGATGATAATGATGTGGAGGACTTGGAGATGTTGCTTGAAGCATACTTTATGCAGTTGGATGGAACTCGTAACAAGATATTGTCTGTTAGGGAGTATATTGATGACACTGAAGACTATGTCAACATCCAACTTGATAACCATAGGAATGAGCTTATCCAACTGCAGTTGACATTGACTATTGCATCATTTGCTATTGCTATTGAGACATTGATTGCTGGTGCATTTGGTATGAACATTCCATGTTCATTATACGAGAAAGACGGAATTTTTTGGCCGTTTGTTGGGACTATCACTGCAGTTTCCGTATTCCTTTTCCTGCTTGTTTTAGCATATGCTAAATGGAAAAAGTTATTGGGATCGTAA 1260 0.4397 MGKKSKGLFTFRRRSKKPAVPSPSPPHPTAVEITSSPSENRLVTKAKKKTGGARLWMRFDRSGRSELVEWEKNTIIRHAAIPARDLRILGPVFSHSSNILARDKAMVVNLEFIKAIVTAEEILLLDPLRQEVLPFVEQLRLQLPHKAQPKLLGGGDEQDLPVPEGGEGLPSELLLPFEFQVLEIALEVVCTYLDSNVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQPEAQLGATTSNNLSIVRRLNSTRSGSVVTSNDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIETLIAGAFGMNIPCSLYEKDGIFWPFVGTITAVSVFLFLLVLAYAKWKKLLGS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02913 419 Gene3D Magnesium transport protein CorA, transmembrane region 357 415 - -
Vifa6g02913 419 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 37 417 IPR039204 -
Vifa6g02913 419 FunFam magnesium transporter MRS2-4 131 350 - -
Vifa6g02913 419 CDD Mrs2_Mfm1p-like 56 416 IPR039204 -
Vifa6g02913 419 Coils Coil 223 257 - -
Vifa6g02913 419 Pfam CorA-like Mg2+ transporter protein 226 410 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vifa6g02913 419 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 355 406 IPR045863 -
Vifa6g02913 419 FunFam Magnesium transporter MRS2-1 44 127 - -
Vifa6g02913 419 Gene3D - 41 127 - -
Vifa6g02913 419 Gene3D Magnesium transport protein CorA, transmembrane region 134 350 - -
Vifa6g02913 419 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02913 Vifa-Chr6 965756084 965759166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02913 6 419 MRS2 Gene Family AT3G58970 66.284 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02913 K16075 - gmx:100786220 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g02913 6 965756084 965759166 Vifa2g02500 2 656302030 656303151 PCT