Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02912 ATGGCAAATTCAAAGAGCTCATCGGGTGTCAGAAATTTTGTGTATCCTGGAAAGCAGGCTCACGCTTTGCTCCCTCCCAAAAGCCCATTTCCTAGTATTTCTCAAGCATATGCTGATTATGTCTCAAATCCTACAGTTGGTTCAAGACCTATTAATAAGCCAAGAGACGGAAACACACACCACCAACGTACTTCATCTGAGAGCCATCTTATTGAGGAGCAGCCATCATGGCTCGATGATCTTCTAAATGAGCCGGATACACCTGTCAGAAAGGGTGGTCATAGGCGTTCATCAAGTGATTCTTTTGCATATGTCGACACTCTTAATGCGCCGAACATCAGTTATGCGGATCATGACGATTATAAATATAAGAATTTCTTATCTATTCCGGCTTGGTCACCTCCAGATTTTGATCGAAACAAAGATGCTCGTCATGTTCCCATGTATTCAGAAATGAATGCAGCAAGACAGAAAAATAGATCATGGGACTCTTTTTCGAATATGAGTGGCGCTCCATCTGGCAAAGACAGCGTAGCTTTTCAGAGATCAGGATCACCGACACCATGTACACTGTATGAAGCAGATCGGATCCTACCAACTGCAAATGAAAATCATGATTCAGTAGAATCTGGCTTACAAGACACTAGATCATCTTTTGAAAGAAAGGACGGTTTGCATGCAAAGTCATCTGCTTCTGAAACAGATACAAAACGCGCTAAACAGCAATTTGCTCAACGGTCACGGGTTCGTAAACTTCAGTACATAGCCGAGCTGGAAAGAAATGTACAGTCTTTACAGGCAGAAGGGTCTGAAGTATCGGCTGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAACAACGTTTAGAAAGTTTAGCACAGGAGCAGCTTATCAAATACTTGGAGCAAGAAGTACTGGAAAGAGAGATTGGAAGATTACGTGGCATGTATCAACAACACCTGCAACAGTCACATCAGCCTCAACAACAACCATCTGGCAGTCATAGACGCACAAACAGCAGAGACCTTGACTCTCAGTTTGCCAACCTTTCTCTCAAGCACAAGGACACCAACCCGGGGCACGACCCTTCAAATGGAGCTCTCAGAATTTAG 1137 0.4336 MANSKSSSGVRNFVYPGKQAHALLPPKSPFPSISQAYADYVSNPTVGSRPINKPRDGNTHHQRTSSESHLIEEQPSWLDDLLNEPDTPVRKGGHRRSSSDSFAYVDTLNAPNISYADHDDYKYKNFLSIPAWSPPDFDRNKDARHVPMYSEMNAARQKNRSWDSFSNMSGAPSGKDSVAFQRSGSPTPCTLYEADRILPTANENHDSVESGLQDTRSSFERKDGLHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNVQSLQAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRGMYQQHLQQSHQPQQQPSGSHRRTNSRDLDSQFANLSLKHKDTNPGHDPSNGALRI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02912 378 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 360 IPR044797 -
Vifa6g02912 378 MobiDBLite consensus disorder prediction 215 242 - -
Vifa6g02912 378 MobiDBLite consensus disorder prediction 326 344 - -
Vifa6g02912 378 Coils Coil 248 303 - -
Vifa6g02912 378 MobiDBLite consensus disorder prediction 326 378 - -
Vifa6g02912 378 MobiDBLite consensus disorder prediction 54 68 - -
Vifa6g02912 378 MobiDBLite consensus disorder prediction 41 74 - -
Vifa6g02912 378 CDD bZIP_plant_RF2 235 283 IPR044759 GO:0003700|GO:0006355
Vifa6g02912 378 Gene3D - 236 289 - -
Vifa6g02912 378 SMART brlzneu 233 292 IPR004827 GO:0003700|GO:0006355
Vifa6g02912 378 SUPERFAMILY Leucine zipper domain 244 286 IPR046347 GO:0003700|GO:0006355
Vifa6g02912 378 MobiDBLite consensus disorder prediction 80 99 - -
Vifa6g02912 378 MobiDBLite consensus disorder prediction 201 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02912 Vifa-Chr6 965568474 965571086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02912 22 307 bZIP Transcription Factor Family AT2G42380 31.457 4.21e-25 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02912 - - cam:101495568 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa6g02912 6 965568474 965571086 Vifa6g02912 6 965568474 965571086 ECH