Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02911 ATGGCAAATTCAAAGAGCTCATCGGGTGTCAGAAATTTTGTGTATCCTGGAAAGCAGGCTCACGCTTTGCTCCCTCCCAAAAGCCCATTTCCTAGTATTTCTCAAGCATATGCTGATTATGTCTCAAATCCTACAGTTGGTTCAAGACCTATTAATAAGCCAAGAGACGGAAACACACACCACCAACGTACTTCATCTGAGAGCCATCTTATTGAGGAGCAGCCATCATGGCTCGATGATCTTCTAAATGAGCCGGATACACCTGTCAGAAAGGGTGGTCATAGGCGTTCATCAAGTGATTCTTTTGCATATGTCGACACTCTTAATGCGCCGAACATCAGTTATGCGGATCATGACGATTATAAATATAAGAATTTCTTATCTATTCCGGCTTGGTCACCTCCAGATTTTGATCGAAACAAAGATGCTCGTCATGTTCCCATGTATTCAGAAATGAATGCAGCAAGACAGAAAAATAGATCATGGGACTCTTTTTCGAATATGAGTGGCGCTCCATCTGGCAAAGACAGCGTAGCTTTTCAGAGATCAGGATCACCGACACCATGTACACTGTATGAAGCAGATCGGATCCTACCAACTGCAAATGAAAATCATGATTCAGTAGAATCTGGCTTACAAGACACTAGATCATCTTTTGAAAGAAAGGACGGTTTGCATGCAAAGTCATCTGCTTCTGAAACAGATACAAAACGCGCTAAACAGCAATTTGCTCAACGGTCACGGGTTCGTAAACTTCAGTACATAGCCGAGCTGGAAAGAAATGCAGAAGGGTCTGAAGTATCGGCTGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAACAACGTTTAGAAAGTTTAGCACAGGAGCAGCTTATCAAATACTTGGAGCAAGAAGTACTGGAAAGAGAGATTGGAAGATTACGTGGCATGTATCAACAACACCTGCAACAGTCACATCAGCCTCAACAACAACCATCTGGCAGTCATAGACGCACAAACAGCAGAGACCTTGACTCTCAGTTTGCCAACCTTTCTCTCAAGCACAAGGACACCAACCCGGGGCACGACCCTTCAAATGGAGCTCTCAGAATTTAG 1122 0.434 MANSKSSSGVRNFVYPGKQAHALLPPKSPFPSISQAYADYVSNPTVGSRPINKPRDGNTHHQRTSSESHLIEEQPSWLDDLLNEPDTPVRKGGHRRSSSDSFAYVDTLNAPNISYADHDDYKYKNFLSIPAWSPPDFDRNKDARHVPMYSEMNAARQKNRSWDSFSNMSGAPSGKDSVAFQRSGSPTPCTLYEADRILPTANENHDSVESGLQDTRSSFERKDGLHAKSSASETDTKRAKQQFAQRSRVRKLQYIAELERNAEGSEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRGMYQQHLQQSHQPQQQPSGSHRRTNSRDLDSQFANLSLKHKDTNPGHDPSNGALRI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02911 373 MobiDBLite consensus disorder prediction 321 373 - -
Vifa6g02911 373 MobiDBLite consensus disorder prediction 201 244 - -
Vifa6g02911 373 Coils Coil 271 298 - -
Vifa6g02911 373 MobiDBLite consensus disorder prediction 215 242 - -
Vifa6g02911 373 CDD bZIP_plant_RF2 235 278 IPR044759 GO:0003700|GO:0006355
Vifa6g02911 373 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 10 355 IPR044797 -
Vifa6g02911 373 MobiDBLite consensus disorder prediction 54 68 - -
Vifa6g02911 373 MobiDBLite consensus disorder prediction 321 339 - -
Vifa6g02911 373 MobiDBLite consensus disorder prediction 41 74 - -
Vifa6g02911 373 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02911 Vifa-Chr6 965568474 965571086 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02911 22 302 bZIP Transcription Factor Family AT2G42380 30.132 1.65e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02911 - - cam:101495568 665.225