Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02883 ATGCATCACCAGAAATGTGTGCTTTTAGACTCTCAAGGTTCTGGGAATAATCGGAAAATAACCACATTTATCGGTGGTCTGGATCTATGTGATCGCAGAGATGATACACCTGAGCATAGGATTTTTCATGATCTTGATACTGTCTTTCATAATGATTTTCATAATCCTACTTTTCAAGCTGGGATTGATCGTCACTGGTGTAAAGCGGAGTCGGAGACAGCAGAGCACGTGCCGCTGCTGTGCAATAAGAGCATTCAGACTTGGCAAAATCTGGACAGTCGAGACACAGCGCATGCAATGCTGCTAAATAGAAACATTTGGAGAGAAAATCTTTCACATATTAAAGGCACTGTCAAAGTAGGAATAGTCAGGTGCAACATAAAATGGAAACGTCCTCCTCAAAATTATATAAGTGCAAAGTTGATGTCTCGTTCTCAAAGTACCACACCAGTGTATGGGAAGGAGTTGGTTATGTTCATGGGAGCCAAAACTGCACGGCTGCAACCAGTTATGACAGTTGATATCAAAGAATTAGGCATGTTAGCAGCGTTGGAGTCAGTGCGAGAGCTGGCCTTTAAGCAAGTTGTTTTGTACGTGGATTCTAAAAGGGATGTGGAAACTTTCAGCTCGGCTATGCCTGGATTATAA 648 0.4228 MHHQKCVLLDSQGSGNNRKITTFIGGLDLCDRRDDTPEHRIFHDLDTVFHNDFHNPTFQAGIDRHWCKAESETAEHVPLLCNKSIQTWQNLDSRDTAHAMLLNRNIWRENLSHIKGTVKVGIVRCNIKWKRPPQNYISAKLMSRSQSTTPVYGKELVMFMGAKTARLQPVMTVDIKELGMLAALESVRELAFKQVVLYVDSKRDVETFSSAMPGL 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02883 215 PANTHER PHOSPHOLIPASE D 1 67 IPR015679 -
Vifa6g02883 215 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1 33 IPR001736 GO:0003824
Vifa6g02883 215 Pfam Phospholipase D Active site motif 2 33 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02883 Vifa-Chr6 958074150 958075246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02883 2 61 Phospholipase D Gene Family (Wang group) AT4G35790 80.000 7.06e-29 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02883 K01115 - gmx:100779740 115.546