Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02876 ATGCCTCTTCCTTTGGTTTCATTAACATCACACATTGATCAGCAAAGCAACGATGCAAACCAAGGTTTGGAATTTCCAATTTCTTTAAAGAAGAAGTTACAAGTCATCGCTGAGAGATTAAATGCAAATAATAGGCTAGACAAGTGTCAAGCTATGTATGTTGAAGTTCAAGGAACGAATGCTCGACGAAGTTTGAAGACGTTGGATTTGAGCTACCTAGAGACTTCAACGGCTGAGTTTGAGGTTGTGCGCGGAATGGATAGTTGCATAGACAAATGGTTTTACAGATGCGTTGGAGAATAA 303 0.396 MPLPLVSLTSHIDQQSNDANQGLEFPISLKKKLQVIAERLNANNRLDKCQAMYVEVQGTNARRSLKTLDLSYLETSTAEFEVVRGMDSCIDKWFYRCVGE 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02876 100 SUPERFAMILY Cullin repeat-like 24 95 IPR016159 -
Vifa6g02876 100 Gene3D Exocyst complex component Exo70 4 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02876 Vifa-Chr6 957207897 957208199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02876 1 93 EXO70 exocyst subunit family AT4G31540 45.161 1.35e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02876 - K07195 gmx:121175138 122.094