Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02832 ATGAAGTGGGGTGGAAGAAAAGCTTCTTCAGCTGCTGCTGCTTCTTCTTCTTCTAAGCCTTCCTTTATCTCTCATGTATCTCCGTTTACGTGGCTGTCAAAGTTCAAGCAGATGAAAATCAACTCAGACTCAGAGACGAAACCTGAGAAGCCGGAGCAGAACGCAGCGTCTGATAATAGTTCATCACAATTTCCTCATGGGAATAGAGGCAGGTTTTATCGAGGTGGTGACGGTGATGATGATGCTTTCTGGAGATTGTCATTTGGTGAAGAGGTTACTGATGAACAAAAGAAGAAAAAAGATATTATGAAGCCGATCGTGTATAATTTGGAGGCTAAAAGAAATGGAAGAAGAAGAAGAAGAAGAGAAGATAAAGATTTGATGAATGAAACAAAGAGTGCAAAGGAACTTGAATACTTAAAGAGGAGATATGAGAGAAAAGCACAGAAAGTTTTACAAGATCAGCTCTTGAAATTACAGAACACAGAAGAGGAAGAACAATTTGGATCAAGTAAGTGTAAATCCTTAGAAAAGGACGAGCTTCAATTCGAATCACCAAGAACCCGTTTATTTTCCCCTTATGTAGATGCAGAAAGTTCTAACCTTGGCCTCGGAAGTATCAGAGAAAACGGCATGAAACAATGTGATGAGTTTAAAGTAAAGGGTAACAAAAAAAGGGAATCAGTTCATGTGAGCAGAGAGCTTCATAGGAGGAAACAAAAGCAGAGCTCCAAGGTAAGAGTGCATTCTCCAAAGATGGCTACAAAAGTCGAAATCTGCAAAATAAAAGCAATAGAAGATAAAAAGAAAGCAAAACTAAAGATGAAGAAACAAGAGGAAATTGTGGAGGAAACAGAAAAAGGTTTAGATAGCTTTGCTGTGGTGAAGCGTTCTTTGGATCCACAACAAGATTTTAGAGATTCAATGATTGAAATGATCAAAGAGAAACAGATAAGTGAGCCAGAAGAAATGGAAGAGTTATTAGCATGTTATTTAAGTTTGAATTCAAATGAATATCATGATTTAATCATCAAAGTGTTTAGGCAAGTATGGTTATATATGAGCCAATCTAGTTTGTGTACTAAATCAGACAAGCAATGTTGTTACTATGATTAA 1116 0.3701 MKWGGRKASSAAAASSSSKPSFISHVSPFTWLSKFKQMKINSDSETKPEKPEQNAASDNSSSQFPHGNRGRFYRGGDGDDDAFWRLSFGEEVTDEQKKKKDIMKPIVYNLEAKRNGRRRRRREDKDLMNETKSAKELEYLKRRYERKAQKVLQDQLLKLQNTEEEEQFGSSKCKSLEKDELQFESPRTRLFSPYVDAESSNLGLGSIRENGMKQCDEFKVKGNKKRESVHVSRELHRRKQKQSSKVRVHSPKMATKVEICKIKAIEDKKKAKLKMKKQEEIVEETEKGLDSFAVVKRSLDPQQDFRDSMIEMIKEKQISEPEEMEELLACYLSLNSNEYHDLIIKVFRQVWLYMSQSSLCTKSDKQCCYYD 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02832 371 Coils Coil 268 288 - -
Vifa6g02832 371 NCBIfam uncharacterized plant-specific domain TIGR01568 292 354 IPR006458 -
Vifa6g02832 371 MobiDBLite consensus disorder prediction 53 67 - -
Vifa6g02832 371 Pfam Transcriptional repressor, ovate 298 353 IPR006458 -
Vifa6g02832 371 ProSiteProfiles OVATE domain profile. 294 353 IPR006458 -
Vifa6g02832 371 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 140 355 IPR038933 GO:0045892
Vifa6g02832 371 Coils Coil 134 165 - -
Vifa6g02832 371 MobiDBLite consensus disorder prediction 1 23 - -
Vifa6g02832 371 MobiDBLite consensus disorder prediction 40 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02832 Vifa-Chr6 949527277 949528392 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vifa6g02832 Ovate 8.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02832 - - tpra:123914565 467.618