Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02765 ATGGATTTTCAAGTCGTCGTTCTCGCCGGCGGCGTCTCCAAAAAACTCATCCCTCTCGTTTCAAAGGAGCTTCCGAATGCTTTGCTTCCGGTGGCGAACCGTCCGCTTCTCTCTTACGTCGTCGAGCTTTTGGAGATTAGCAACCTTAAAGATCTCATTGTGGTAGTTGAAGGTCAAGATGCTGCTCTTAACGTTGGGGCTTGGATTTCAGGAGCTTATGCTGATCGCCTCCATGTCGAGGTTGCTGCAGTTCCTGAGGATGTGGGAACAGCTGGTGCAATTCGAGCTATTGCACGCCACCTATACGCAAAAGACATTTTGATTGTCAGCGGTGATCTTGTTTCCGATGTGCCGATTGGTGCTGTTGCAGCTACTCATCGACGTCATAATGCGGTTGTCACTGCTTTGCTTTGTAATTCTCCTATAAGTGGACCTTTAGAGTCGGTGTCCTCTGTTGGGAAAGACAAAACCAAGAAACCTGGCCGCTATGATTTGATAGGGCTGGACCCTACGAAACAGTTTTTACTTCACATAGCAACTGGAGCTGAAGTTGAAAAAGATCTTCGAATTCAGAAGAGCATACTCCGTGCTGTTGGCCAGATAGAAATAAGAGCTGATCTAATGGATGCCCACTTGTATGCATTCAAAAGATCAGTTCTACTAGAAGTTCTAGATCAGAAGTGTGAATTTAATAGCTTAAAACATGATGTATTGCCATATCTTGTCCGCAGCCAACTGAAATCGGAAGTATTATTAAATGGAACACCACAAGCAGAAGAAAATGGAACTGAGAATGGTATTTCTCAAAGGAATCAACAAATGCTCTCTCAAATACTTGCTAATGCATCTGAGCCGACATTTCATCTACGTCATGCACTTAGTACTAATGGTTCTGACTCTGTTCGAAGAACCCATAAATGCTGTGTCTATATTGCTGGAAGTAGCAAGTACTGTACTCGCCTGAATTCTATACAAGCATACAATGATATAAACCGGGATGTGATAGGAGAAGCTAGTCATTTGTCAGGGTATTCCTTCTCTACTCATAACAACATTATCCATCCCACTGCAGAGCTTGGGGCAAAAACAACTGTAGGACCACATTGTATGCTGGGGGAAGGTTCGCAGATGGGTGACAAATGCAGTGTAAAACGATCTGTCATTGGCCGCCACTGTAGGATAGGTGCCAATGTTAAGGTTGTTAATTCAATAGTTATGAACCATGTTACTATCAGTGATTTTTGTTCAATCCAAGGTTCTGTCATCTGCAGCAATGTACAGCTCCAAGAACGTGCAATACTAAAAGATTGCCAAGTCGGAGCAGGTTTCGTGGTCACTGCAGGTAGTGAGTGCAAAGGGGAGGTATTGGCTAAGAAATGA 1380 0.4384 MDFQVVVLAGGVSKKLIPLVSKELPNALLPVANRPLLSYVVELLEISNLKDLIVVVEGQDAALNVGAWISGAYADRLHVEVAAVPEDVGTAGAIRAIARHLYAKDILIVSGDLVSDVPIGAVAATHRRHNAVVTALLCNSPISGPLESVSSVGKDKTKKPGRYDLIGLDPTKQFLLHIATGAEVEKDLRIQKSILRAVGQIEIRADLMDAHLYAFKRSVLLEVLDQKCEFNSLKHDVLPYLVRSQLKSEVLLNGTPQAEENGTENGISQRNQQMLSQILANASEPTFHLRHALSTNGSDSVRRTHKCCVYIAGSSKYCTRLNSIQAYNDINRDVIGEASHLSGYSFSTHNNIIHPTAELGAKTTVGPHCMLGEGSQMGDKCSVKRSVIGRHCRIGANVKVVNSIVMNHVTISDFCSIQGSVICSNVQLQERAILKDCQVGAGFVVTAGSECKGEVLAKK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02765 459 Pfam Nucleotidyl transferase 6 137 IPR005835 GO:0009058
Vifa6g02765 459 CDD LbH_eIF2B_gamma_C 370 450 - -
Vifa6g02765 459 SUPERFAMILY Nucleotide-diphospho-sugar transferases 4 425 IPR029044 -
Vifa6g02765 459 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 348 IPR029044 -
Vifa6g02765 459 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT GAMMA 1 459 - -
Vifa6g02765 459 CDD eIF-2B_gamma_N 3 220 - -
Vifa6g02765 459 Gene3D Hexapeptide repeat proteins 349 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02765 Vifa-Chr6 933403461 933407266 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02765 315 450 Eukaryotic Initiation Factors Gene Family AT2G34970 27.451 2.59e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02765 K03241 - gmx:100783346 804.283