Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02758 ATGGGGTTACTTTCATTGATTGTGTTTAGCACCTATAGACTTGCAATGTGGTATGGTTCCATGTTAGTCCTTGAGAAGGGATATACTGGTGGACCTGTTATGAGTGTAATCATAGCTTTTATGACTGGTGGAATGTCGTTGGACGTGCAAATATTTGCTGGATTTTCACTGTTTGTTCCAAGTGGTACAACTACTGCTTTGGTGGGTCAAAGTGGAAGTGGAAAGTTTACTGTGATCAGTTTATTGGAAAGATTCTATGATCATGTTGCTGGAGAAGTACTTATAGATGGTGTGAATATGAATAACTTGCAACTTAAATGGATAAGGGATCATATTGGGTTGGTTAGTCAAGAGCCTATATTGTTTACTACTACTATCAGAGAGAACATAGTGTATGGGAAACAAGGTGCAACTGATGAGGAGATAACAGTAGAAAAAACACTTGCTAATGCGATAAAGTTCATCGACAAACTGCCTCAGGGCCTTGACACCATGGCGGGACAAAATTTATGA 513 0.3918 MGLLSLIVFSTYRLAMWYGSMLVLEKGYTGGPVMSVIIAFMTGGMSLDVQIFAGFSLFVPSGTTTALVGQSGSGKFTVISLLERFYDHVAGEVLIDGVNMNNLQLKWIRDHIGLVSQEPILFTTTIRENIVYGKQGATDEEITVEKTLANAIKFIDKLPQGLDTMAGQNL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02758 170 Gene3D ABC transporter type 1, transmembrane domain 1 47 IPR036640 GO:0005524|GO:0016020
Vifa6g02758 170 PANTHER ABC TRANSPORTER B FAMILY 2 47 IPR039421 -
Vifa6g02758 170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 168 IPR027417 -
Vifa6g02758 170 Pfam ABC transporter 55 146 IPR003439 GO:0005524
Vifa6g02758 170 Gene3D - 48 168 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02758 Vifa-Chr6 932800282 932801067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02758 48 169 Calmodulin-binding Proteins AT2G36910 54.918 4.69e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02758 K05658 - gmx:100801771 221.861