Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vifa6g02734 | ATGGATACTAAATGTTCTAGAAGAAAGATTCAATTGCTTGTAACTTCAGCTCTTCTTTTACTGCAAAACTTTCTTATCATCCCTCAGATATTGGCAGAGGAAACCAGCACTGTTCATATTGTATACATGGGAGATAAGATATATCATAATCCAGAAACTACTAAAAAGTTTCACCACAAAATGCTGTCTTCACTCCTAGGAAGCAAAGAAGATGCAAAGAATTCACTTCTTTATAGCTATAAGCATGGATTTTCAGGGTTTGCTGCTAGAATGACAAAGACTCAAGCTGAAGATATAGCAAAGTTTCCAGAGGTAGTTTCTGTCATTCCTAATGGCATTCACAAACTCCACACAACTAGAAGCTGGGACTTTATTGGGGTCCATCATTCGTCCTCGAAAACTGTTTTCGCTGAAAGCAACTATGGTGAAGGAACCATCATAGGTGTCATAGACACAGGCATTTGGCCAGAGTCGGCGAGTTTTAATGATGAAGCAATGGGAAACATCCCATCGAGGTGGAAAGGAGTTTGTCAAGTTGGAGAAAATTTCAACTCCACAAACTGCAACAAGAAGATAATTGGTGCTAGATGGTTCCTAAAAGGAATAAATGATCATACTAAGAACCTAATCCTTGGAAACAACGACACGTCAGAATATCTCTCGGCTAGAGATGCTATTGGCCATGGAACTCACACAGCTTCAACAGCAGCTGGTTATTTTGTAGAAAATGCAAACTATAAGGGACTTGCTTCTGGTTTAGCAAGGGGAGGAGCGCCTTTAGCTCACTTGGCTATCTACAAAGTTTGCTGGGACGTTCCTGTTGGACACTGCAGCGATGCTGATATCCTCAAAGCATTTGACATGGCTATACATGATGGAGTGGATGTTTTAACCGTTTCTCTTGGCATTGACATTCCTTTGTTCTCTTACGTTGATCATCGCGACACGATAGCAATTGGTTCTTTCCATGCAACTTCCAAAGACATCACAGTTGTTTGTTCAGGTGGAAATTCTGGTCCTATTTCTCAAACCGTCACAAATACAGCACCATGGCTCATTACAGTTGCAGCCACTACAATTGATAGGGCTTTTCCAACCGCCATTACACTCGGAAATAACCTCACTTTGTGGGGACAATCCATTGACAATGGAAAACATAATCTTGGATTTGTTGGCCTCACATACTCCGAACGCATTGCTCGTGATCCATCAGATGATTTAGCCAAGGATTGTCAGTCGGGAAGTCTGAACGAAACAAAAGCAGCAGGCAAAATTGTTCTATGCTTTTCAGTATCGGATCAACAAGATATTGTTTCTGCAGCACATACAGTGAAGGAAGCGGGTGGAATTGGACTAATTTATGCACAGCGTCATGAAGACGGACTCGGCGAATGTGGTATACTTCCATGTATTAAGGTAGATTATGAAGTAGGAACACAACTATTAACCTATATTAGACGAGCAAGGTTTCCAGCTGCAAGGATGAGTTTGCCGAAGACTGTTATTGGAAAATGGATATCTCCAAGAGTTGCATCTTTCTCATCTAGAGGACCTAGTACCATGTCTCCAACTGTGCTAAAGCCTGACATAGCTGCACCTGGTGTGGACATTTTGGCTGCATTTCCACCTAAGAGAACTAAAAAGAGCAGTGGCTTTACAATCTTATCTGGAACTTCAATGTCATGTCCACATGTGGCAGGAATAGCAGCACTTATCAAATCCGAACACCCAACTTGGTCACCTGCAGCCATAAGATCAGCTTTGGTAACAACAGCCTCTCAAAGTGGAACTGATGGAAGTCTTATATCAGAAGAAGGTTCCACAAATAAGGCAGCAGACCCATTTGACATTGGGGGCGGGCACGTGGATCCCAACAAAGCAATGAATGCAGGACTCATATACAACATCACCACAGAGGATTATATTCAATTCCTATGTTCCATGGGTCATAATACAGCATCCATTAGAAAAGTTACCAAAACAACTACAAGTTGCAACAAACAAAAAAGCAAAACACTGATAAACCTTAATCTTCCTTCCATATCGATTCCCAATTTGAAGAGGGATACAACAGTAGTGAGAGCAGTGACAAACGTTGGAAACATAAATGCAGTCTACAAAGCTGTAGTGAAGACTCCATATGGTATAAAAGTGAAAGTTGAACCTCAAATTTTGAGGTTTAATTCCGATACTAAAGTTCTTACCTTCAATGTAAGCTTCATTTCAACACAAAAGTTGCATGGAAATTACAGATTTGGAAGCCTAACATGGACAAATGGAGAGCATTTGGTGAGGATACCAGTAGCTGTTAGGACCATACAATTTGAATCTTAA | 2334 | 0.4092 | MDTKCSRRKIQLLVTSALLLLQNFLIIPQILAEETSTVHIVYMGDKIYHNPETTKKFHHKMLSSLLGSKEDAKNSLLYSYKHGFSGFAARMTKTQAEDIAKFPEVVSVIPNGIHKLHTTRSWDFIGVHHSSSKTVFAESNYGEGTIIGVIDTGIWPESASFNDEAMGNIPSRWKGVCQVGENFNSTNCNKKIIGARWFLKGINDHTKNLILGNNDTSEYLSARDAIGHGTHTASTAAGYFVENANYKGLASGLARGGAPLAHLAIYKVCWDVPVGHCSDADILKAFDMAIHDGVDVLTVSLGIDIPLFSYVDHRDTIAIGSFHATSKDITVVCSGGNSGPISQTVTNTAPWLITVAATTIDRAFPTAITLGNNLTLWGQSIDNGKHNLGFVGLTYSERIARDPSDDLAKDCQSGSLNETKAAGKIVLCFSVSDQQDIVSAAHTVKEAGGIGLIYAQRHEDGLGECGILPCIKVDYEVGTQLLTYIRRARFPAARMSLPKTVIGKWISPRVASFSSRGPSTMSPTVLKPDIAAPGVDILAAFPPKRTKKSSGFTILSGTSMSCPHVAGIAALIKSEHPTWSPAAIRSALVTTASQSGTDGSLISEEGSTNKAADPFDIGGGHVDPNKAMNAGLIYNITTEDYIQFLCSMGHNTASIRKVTKTTTSCNKQKSKTLINLNLPSISIPNLKRDTTVVRAVTNVGNINAVYKAVVKTPYGIKVKVEPQILRFNSDTKVLTFNVSFISTQKLHGNYRFGSLTWTNGEHLVRIPVAVRTIQFES | 777 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vifa6g02734 | 777 | FunFam | Subtilisin-like protease SBT1.5 | 645 | 773 | - | - | |
| Vifa6g02734 | 777 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 121 | 628 | - | - | |
| Vifa6g02734 | 777 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 40 | 770 | IPR045051 | - | |
| Vifa6g02734 | 777 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 29 | 117 | IPR037045 | - | |
| Vifa6g02734 | 777 | SUPERFAMILY | Subtilisin-like | 116 | 632 | IPR036852 | GO:0004252|GO:0006508 | |
| Vifa6g02734 | 777 | FunFam | Subtilisin-like protease SBT1.5 | 144 | 371 | - | - | |
| Vifa6g02734 | 777 | Pfam | Subtilase family | 142 | 596 | IPR000209 | GO:0006508|GO:0008236 | |
| Vifa6g02734 | 777 | Gene3D | Peptidase S8/S53 domain | 144 | 641 | IPR036852 | GO:0004252|GO:0006508 | |
| Vifa6g02734 | 777 | FunFam | subtilisin-like protease SBT1.5 | 361 | 502 | - | - | |
| Vifa6g02734 | 777 | Pfam | Peptidase inhibitor I9 | 38 | 117 | IPR010259 | - | |
| Vifa6g02734 | 777 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 557 | 567 | IPR023828 | - | |
| Vifa6g02734 | 777 | FunFam | Subtilisin-like protease SBT5.3 | 28 | 117 | - | - | |
| Vifa6g02734 | 777 | CDD | PA_subtilisin_like | 368 | 494 | - | - | |
| Vifa6g02734 | 777 | Pfam | Fibronectin type-III domain | 675 | 770 | IPR041469 | - | |
| Vifa6g02734 | 777 | Gene3D | - | 361 | 502 | - | - | |
| Vifa6g02734 | 777 | CDD | Peptidases_S8_3 | 114 | 593 | IPR034197 | - | |
| Vifa6g02734 | 777 | Gene3D | - | 645 | 773 | - | - | |
| Vifa6g02734 | 777 | PRINTS | Subtilisin serine protease family (S8) signature | 556 | 572 | IPR015500 | - | |
| Vifa6g02734 | 777 | PRINTS | Subtilisin serine protease family (S8) signature | 224 | 237 | IPR015500 | - | |
| Vifa6g02734 | 777 | PRINTS | Subtilisin serine protease family (S8) signature | 142 | 161 | IPR015500 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vifa6g02734 | Vifa-Chr6 | 927330291 | 927333801 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vifa6g02734 | 32 | 772 | Subtilisin-like Serine Gene Family | AT1G32960 | 51.406 | 0.0 | 763 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vifa6g02734 | - | - | gmx:100792709 | 1274.61 |