Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02723 ATGCATAACCAAGATCAAAGAAAAACTCACACTCCAGGGCACGAGAATCATGGAGTTTACGTGTGTAACAAATGTGGATGGCCGTTTCCGAATCCACATCCCAGTGCTAAACACAGACGCGCTCACAAGAAGATCTGTGGAACCGTTCATGGTTACAAACGGAAACAAAACGGTTCAGATGATGAACGTGTTTCGGATGATGATTACAAAACACCGGGTTTGCTTTTGTCAACTTCCAACAATGACAAGGGTAATATTGGAATTAAAGCAAAATTTACTAGGGCAGAAAGTGATGTGTTTTCAGATGCAGTTGCTGATTTTCCAGATACTGGAGTTAAGGATCATTTTCTTCTACAAACCCTGAATGGGTCTTCTGAGGATAATGATTTTAATGCTACAGATTTGACTCCACTGATTGCCAACTCTAGCAATGAAAGTTTTGAAGTCGGAAATATAGTCGGGTCGCAAGGTCAATTACCAGGCTCTACTGTGGATCCATTAATAAGCTCAGTTGCAGATTCAAAGGCTGAAGAATTGAGTATTGTGCATGGTGATGGTTTTTCTGGTCTGTCAAGTGACTCAAGTATCAGCAAAGCTGCAAGTGATATTTCACCAGAAAAAAATATCTATGATGGTGAAGATGTAACAGGTTCTCACTTGACACGTGGTGAAAACGAGTCTAATTTGAAAGGAAAGGATGAGGTAAAATCAGAAAGAGACATGGTTGAAATTGTGGAGTCAACTAATAACATTGTAGGTGATGAAGCTGTTAATCCAAAGGAAAAGAAGGGATCCGAGTTCGTTTCTTTGCAGCCTCAATATGAACTTCCACTAGAAGTAAACTCGTCTATTATCACCAAAGACGTGCAGGTAGAATCTGCAAATGCAATAGAGTCCACTAACAGTAGTGAAGTCAAGGTTTTGCAGGAAAAGGAAGACGTGAATGTTAGTAGTAATCCACTTCCTCTGCATGATGATAGACTTGGTGTAGCTTATCCGCACAGCAAGTCATTGAAACATGAGGAAGATGTCGAGTCATTGAAACATGAGGAAGATGTTAGCAAGGAAAGTAATTTTCATTTCAACACAAGCCAATTAAGTGAAAGTAGTGGTGTTCTCTCTGAAGACATACATGCTGAGCATGGCTCTGAATTTTCTTTAGGCGAGCTTGCAACTGAAACTTGTCAAAGATCACATGAAATTGGAGTGTCTATGAAAGCTGAGATGAGCGAGAATGATTTTTCAGAAGAGCATGGACCTGATGACATTCACGAAAATTCTCAACCCAAAGGTAGTTTAATGGTTTCATCGAATGAATATCGAAGGGAGGCATCCTTTCAGTCTGCGACTGATGAAACATTTGACATCATCAATGTTACTCATCATCCGAATGACACAACTGAAATAAATGATGTATCTGTAGATGGAAAGGTTGCAGGAGCTAATGTGGAAAGTGACACTGAAGTTCTATTGAATGATTATCAACCTAGTGACCTCTTGCAATCTGAAGTTGAGGAATCAAGTGTCTTATATAAGAATAATGGTGATGATGCTGGTGAATTGGGTAAAACTGAACAGTGTGATAGAACTGAAGATGAAATCTATAGCAATATCAAATTATATGAGGAGCATAACGAATTCACTGGTGTTGCTGTTGACTCACATGAAGAACAAGCTACACATCTATTAGTGAAGACTGCAGAAGACATTTCCATCAAGCATACACCACATTCTTCAACCAACACCAAGCCTTCTGCTCAACACGATTCTGCCGTTGAAGATGATTCAAATGGAGAGTCTGTTCAAGATCAAGGAATTGATACTTCTGCTGTCTCGCATGTAGCTACTGAAGACCTTACCAGCAAGTATACAGCACATTCTTCTTTAAATACTAAGTCTTCTGCTCAACATGTTTCTGCTGTCGAAGATAATTCAGTTGGAGAAGTGTCTAGAATTACTGCTGTGCCACTTTCGGTTCAAGATCAAATTGTTAATAACTTGATTAAACCAACTTCTTCCGGAACGGATGCTTCAGTTGACTCTAGTAGCCGGCGTGAAAGTTTGGAAGGGAACTGGGGCTCCAGTTCAGTTATCTCAGTGATATCCGATGCACCAGCTGTTATTGATGCCGAAACTTTACCTCCAATCGGTTCATTGGCAACATCAGAAGAAGGCAAATCTGACCTGAACTCCCTAGAGGCTGCACCTGCAGATAGACAGCTATCTGGAAAATCAGGAACATTTGAACTGCCATCTTTCACGACATTGGTTGAGCCTAACCATGCGGCTGCTAGTCCTAAAGATGCTGCTTCTGAAATCCCGAACCCTCAACCATTAAGTTCCACCTTGCCAGCCGGTTGGTTTCCAACCCTGAATCAGGTTATCAATGATTCTGAAGGGAGAAAGAAAAACGAAGAAACAATTGCCAAAATAACAAACCGGAGCAGCAGTAAAGAGCACACACCTCTGAAGAGTCTCTTGGGAGAGGTTACTCATAGCAGCAAAAAGCCAAAATCGCCAAAAGTTGAAGAAACTAATAATGTGTCTGGATTGGCAACTGTTAACTCAATTCTTGGTCCCGAGTCCCCTTCGGCAGCCCAAGCAGCGAAAGAAAAGGCTGCAGATGAATGGAACTCTCCAGCAAGATATCCTGCAAATATCAAGAGAGAGAAAAAGAAATTGAAGAGCAAACCATTTTGGTTACAGTTTGTTTGTTGCTCAACAGCAGTGGATCATCCTCAAAGAACGTAG 2751 0.4093 MHNQDQRKTHTPGHENHGVYVCNKCGWPFPNPHPSAKHRRAHKKICGTVHGYKRKQNGSDDERVSDDDYKTPGLLLSTSNNDKGNIGIKAKFTRAESDVFSDAVADFPDTGVKDHFLLQTLNGSSEDNDFNATDLTPLIANSSNESFEVGNIVGSQGQLPGSTVDPLISSVADSKAEELSIVHGDGFSGLSSDSSISKAASDISPEKNIYDGEDVTGSHLTRGENESNLKGKDEVKSERDMVEIVESTNNIVGDEAVNPKEKKGSEFVSLQPQYELPLEVNSSIITKDVQVESANAIESTNSSEVKVLQEKEDVNVSSNPLPLHDDRLGVAYPHSKSLKHEEDVESLKHEEDVSKESNFHFNTSQLSESSGVLSEDIHAEHGSEFSLGELATETCQRSHEIGVSMKAEMSENDFSEEHGPDDIHENSQPKGSLMVSSNEYRREASFQSATDETFDIINVTHHPNDTTEINDVSVDGKVAGANVESDTEVLLNDYQPSDLLQSEVEESSVLYKNNGDDAGELGKTEQCDRTEDEIYSNIKLYEEHNEFTGVAVDSHEEQATHLLVKTAEDISIKHTPHSSTNTKPSAQHDSAVEDDSNGESVQDQGIDTSAVSHVATEDLTSKYTAHSSLNTKSSAQHVSAVEDNSVGEVSRITAVPLSVQDQIVNNLIKPTSSGTDASVDSSSRRESLEGNWGSSSVISVISDAPAVIDAETLPPIGSLATSEEGKSDLNSLEAAPADRQLSGKSGTFELPSFTTLVEPNHAAASPKDAASEIPNPQPLSSTLPAGWFPTLNQVINDSEGRKKNEETIAKITNRSSSKEHTPLKSLLGEVTHSSKKPKSPKVEETNNVSGLATVNSILGPESPSAAQAAKEKAADEWNSPARYPANIKREKKKLKSKPFWLQFVCCSTAVDHPQRT 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02723 916 MobiDBLite consensus disorder prediction 207 236 - -
Vifa6g02723 916 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 907 - -
Vifa6g02723 916 MobiDBLite consensus disorder prediction 669 690 - -
Vifa6g02723 916 MobiDBLite consensus disorder prediction 570 608 - -
Vifa6g02723 916 MobiDBLite consensus disorder prediction 47 76 - -
Vifa6g02723 916 MobiDBLite consensus disorder prediction 409 431 - -
Vifa6g02723 916 MobiDBLite consensus disorder prediction 409 425 - -
Vifa6g02723 916 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 42 IPR013087 -
Vifa6g02723 916 MobiDBLite consensus disorder prediction 761 786 - -
Vifa6g02723 916 MobiDBLite consensus disorder prediction 813 880 - -
Vifa6g02723 916 MobiDBLite consensus disorder prediction 843 862 - -
Vifa6g02723 916 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Vifa6g02723 916 MobiDBLite consensus disorder prediction 54 69 - -
Vifa6g02723 916 MobiDBLite consensus disorder prediction 573 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02723 Vifa-Chr6 925345467 925349312 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vifa6g02723 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02723 - - psat:127101544 1488.4