Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02721 ATGCAATCTCTCAAGTTACGCCCTCTTGTTTTTTATCCTCCTTTCTCTTCTAACTCACTTCGATCTTTTCTCCTTTCATTTTCTACTGCTTCTTCATCAACCCCAAAATACCATCACTCAAAAGAAGCCACTTTTCTATTTGACTTCCTTAATTCCAACTTCAAATTATCTAAACCTCAATCCGTTTTCATCTCTAAGCGTCTTTCAGGAACCACCTTCCCTCGAAACCACCCCTTGTCTGTAATCAACTTTTTCAAACAAATTGGGTTTTCTCAAACTCAGATTCAAACTATCATTCGTCAGAGAGTTCAAATACTGTTTTCAGATGTTGATAAAACTCTCAGACCTAAACTTGACCTCTTTCAACAACTGGGTTTTCAGGGTTCTGATTTAAGCGCCTTTATTTCTAAGTATCCAACCATTTTGACTGCTAGTTTGAACAAAACATTGGTTCCTTCGGTGGAAGCTATCAAGAAAATTGTGCGCAATGAGAAAGATCTTATTCATGTTTTGTGCAAATGTGGTCAGATACTCCCAAAGTACCAACTATTTGTTTCCAACATTGCTTTCTTAGAGAGCTGTGGCATTGTTGGGAATCAGGTTTTGATTCTACTCAAACGACAATCGAGACTTTTGTGTTTATCACAATCTGCTATTAGAAACTATGTTTTGCAAGCTGTGGAATTGGGTTTCCATCAAAATTCAAGAATGTTGATTCACGCCCTTCATACGATAAGTGGTTTGAGGAAGGAAACATTTAAGAGAAAGCTCGATTTAATTCAGAGTTTTGGGTTTTCTAAAGATGAAACCTTGCAAATGTTCAAAAAGTATCCCGCTTTATTTAGGGTATCAGACAAAAAATTAAAGGTGGGAATTGAATTCTTCTTACATACAGTTATGCTGCCAAAGTCGGCATTGGCTAACCAGCCTGTGATTTTGATGTATAGCATTGAGGATCGAGTGTTTCCTCGATATAGAGTTTTTCAGCTTTTGAAATCACATAATCTATGTAAGGTTCCCAGCTTTGTTTATGTGTTATGCTTGTCCGAGGAGATGTTTTTGGGCAAGTATATATCAAAGTTTAAAGAAAATACAGAGGCGTTATTGATAGCTTACAAGGGGCATCATATATCAGGGTAA 1140 0.3684 MQSLKLRPLVFYPPFSSNSLRSFLLSFSTASSSTPKYHHSKEATFLFDFLNSNFKLSKPQSVFISKRLSGTTFPRNHPLSVINFFKQIGFSQTQIQTIIRQRVQILFSDVDKTLRPKLDLFQQLGFQGSDLSAFISKYPTILTASLNKTLVPSVEAIKKIVRNEKDLIHVLCKCGQILPKYQLFVSNIAFLESCGIVGNQVLILLKRQSRLLCLSQSAIRNYVLQAVELGFHQNSRMLIHALHTISGLRKETFKRKLDLIQSFGFSKDETLQMFKKYPALFRVSDKKLKVGIEFFLHTVMLPKSALANQPVILMYSIEDRVFPRYRVFQLLKSHNLCKVPSFVYVLCLSEEMFLGKYISKFKENTEALLIAYKGHHISG 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02721 379 FunFam Mitochondrial transcription termination factor-like 146 365 - -
Vifa6g02721 379 PANTHER CGI-12 PROTEIN-RELATED 48 361 IPR003690 GO:0003690|GO:0006355
Vifa6g02721 379 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Vifa6g02721 379 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Vifa6g02721 379 SMART mt_12 236 266 IPR003690 GO:0003690|GO:0006355
Vifa6g02721 379 SMART mt_12 303 334 IPR003690 GO:0003690|GO:0006355
Vifa6g02721 379 SMART mt_12 271 302 IPR003690 GO:0003690|GO:0006355
Vifa6g02721 379 SMART mt_12 202 232 IPR003690 GO:0003690|GO:0006355
Vifa6g02721 379 Gene3D Transcription termination factor 3, mitochondrial 181 366 IPR038538 -
Vifa6g02721 379 Pfam mTERF 150 260 IPR003690 GO:0003690|GO:0006355
Vifa6g02721 379 Pfam mTERF 260 354 IPR003690 GO:0003690|GO:0006355
Vifa6g02721 379 Pfam mTERF 82 174 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa6g02721 mTERF 9.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02721 K15032 - csin:114301363 316.235