Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02674 ATGCCGTTATCACAAACCCTAATCACTCCTGATCTAGCTATTGCTTTCCATATCAGAAACCCTCACACCACTAACACAAACACTAACAACGCTAATCCGCAACACCAACAGTCTCATCAAAATCAACATCAACAGCACCAACATCAACCTTCTTCTCTTCCTTCCTCCACCGAGTTTGCCGATTTCCGGCGAACTCGGTTCCGAACAGCCGGGGAAGAGCCGGCCAGAACACTCAAAAGACCGCGACTCGTTTGGACACCGCAACTCCATAAACGTTTTGTTGACGCCGTGGCACACCTCGGAATAAAAAACGCTGTTCCGAAGACGATAATGCAGCTTATGAGTGTTGATGGTTTAACCAGAGAAAACGTCGCCAGGTCACTTGCAGAAATATCGCCTTTATCTTAA 408 0.4706 MPLSQTLITPDLAIAFHIRNPHTTNTNTNNANPQHQQSHQNQHQQHQHQPSSLPSSTEFADFRRTRFRTAGEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVARSLAEISPLS 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02674 135 MobiDBLite consensus disorder prediction 61 76 - -
Vifa6g02674 135 Pfam Myb-like DNA-binding domain 84 124 IPR001005 -
Vifa6g02674 135 Gene3D - 77 131 - -
Vifa6g02674 135 MobiDBLite consensus disorder prediction 21 76 - -
Vifa6g02674 135 NCBIfam myb-like DNA-binding domain, SHAQKYF class 81 125 IPR006447 GO:0003677
Vifa6g02674 135 MobiDBLite consensus disorder prediction 21 59 - -
Vifa6g02674 135 SUPERFAMILY Homeodomain-like 77 125 IPR009057 -
Vifa6g02674 135 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 125 IPR044841 GO:0003700|GO:0006355
Vifa6g02674 135 FunFam Two-component response regulator 76 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02674 Vifa-Chr6 913772296 913772703 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02674 1 128 G2-like Transcription Factor Family AT3G10760 63.359 3.30e-45 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vifa6g02674 Myb_DNA-binding 1.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02674 - - ccaj:109802866 150.599