Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02668 ATGGTTTCATCAAAACATTATCAAGTTTCATTTTCAATCACCTTGTTTCTTTGTCTCCACATAGTAAATTCTCAGATCATTGATGTTCCAATATTATCTCCAGTATTAACTCCATTAGTCCCTGACCTATTAAACTTCTTAGATCAAAGACTCGAATTAGTTTTCTCAATCATTCAATCCTTCAAAAACACAATAACCTCAGATCCATTAGGAATAACCTCAACATGGGTTGGTTCAGATATATGTAAGTACAAAGGCTTTTACTGCGATAACCCACCGGATAATTTCTCCGCCACCACCGTTGCCTCCATCGATTTCAACGGCTTCAACCTCGCCTCCCCGTCTCTGGACAATTTCATCGATCAACTCCCTGACTTAGCTCTCTTCCATGCAAACTCCAACAATTTTTCAGGTACAACATGCGAAACAACAGCATCTTATATCACATTAGCTAACAACAAATTCTCCGGTCCAATTCCTCCTAGTATAGGAAAAGCATCATCCACTTTAACCGAAGTTTTGTTATTAAACAACCAATTAACAGGCTGTCTTCCTTACGAAATAGGTTTGCTCCAAAACGTGGAACTTTTCGACGCGGGTAGTAACCTTTTAACAGGTCCATTACCTTGGTCATTTGCGTGTTTGAAGAAGGTGGAAGAGTTGAAATTTGATAGGAACATGTTGTATGGTCAGGTTCCAGAAGTGGTTTGCGCCTTGGAGAGTTTGTCGAATTTAACATTGTCTTATAACTATTTTAACAGATTGGGACCATTGTGCAGAAGGCTGGTAAAAATTGGTGTGCTTGATGTGAAGAATAACTGTATTTTCGATCTTCCTGATCAAAAACCAATGGAGGAGTGTGTGAAGTTTTCTTCACTTCCGAGAACATGTCCGCGTCCTGGAACGTTTAATCTTATACCGTGTGAGAGTCCAACACGGGCAAAACCCCCCGGAAATAAGAGGAAACTGTTGTCATATTCTGCTCTTGAGAGAAAGAGAATAGTTCTGAGTTAA 1014 0.3964 MVSSKHYQVSFSITLFLCLHIVNSQIIDVPILSPVLTPLVPDLLNFLDQRLELVFSIIQSFKNTITSDPLGITSTWVGSDICKYKGFYCDNPPDNFSATTVASIDFNGFNLASPSLDNFIDQLPDLALFHANSNNFSGTTCETTASYITLANNKFSGPIPPSIGKASSTLTEVLLLNNQLTGCLPYEIGLLQNVELFDAGSNLLTGPLPWSFACLKKVEELKFDRNMLYGQVPEVVCALESLSNLTLSYNYFNRLGPLCRRLVKIGVLDVKNNCIFDLPDQKPMEECVKFSSLPRTCPRPGTFNLIPCESPTRAKPPGNKRKLLSYSALERKRIVLS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02668 337 SUPERFAMILY L domain-like 57 280 - -
Vifa6g02668 337 Gene3D Ribonuclease Inhibitor 166 298 IPR032675 -
Vifa6g02668 337 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 140 232 - -
Vifa6g02668 337 Gene3D Ribonuclease Inhibitor 55 165 IPR032675 -
Vifa6g02668 337 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 140 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02668 Vifa-Chr6 911015632 911016870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02668 46 294 Leucine-rich Repeat extension Gene Families AT3G24480 30.960 1.63e-39 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02668 - - aew:130755349 321.242