Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02608 ATGGAGATTTTTGCAATTTTAGTTTGCATCTTCCTTTTTCTCTCAACTCTTGTCATCTCTTTTCCATTCATAAAGAAAAACAAACCCACTTCCAAGCCTAAGCTTCCTCCAGGTTCAATGGGCTGGCCTTACATAGGACAAACCCTTCAACTCTATTCTCAACACCCCAATATCTTCTTTGCTTCTAAACAAAAAAGATATGGAGAAATATTTAAAACACATATACTAGGATGTCCTTGCGTGATGCTAGCAAGTCCAGAGGCTGCAAGATTTGTGTTGGTGACTCATTCTCACTTGTTCAAACCTACATACCCCAAAAGCAAAGAGAAGCTTATTGGTTCTTCTGCATTGTTCTTCCACCAAGGAGATTATCACACTCGCATTAGGAAGCTTGTTCAAACCTCGCTTTCTCCTGAATCAATCAAGAAACTGATCCCGGATATTGAAACTCAAGTCATTTCATCCTTGGAATCTTGGGTTTCTGTTGGACAAGTCATTAACGCTTTCTGTGAAATGAAAAAGTTCTCTTTCAATATCGGAATCCTCTCCGTTTTTGGTAACTTGGAAAACAATTACAGAGAACAGCTTAAGGAGAATTACAGCATTGTAGAGAAAGGCTACAATTCTTTTCCAACTAGGATACCTGGTACTGCATACTCCAAAGCACTTTTGGCAAGGAAGAGAATTCATGAGATTATAAGTGAGATAATTTGCAAGAAAAGGGAGCAGAAATTGATTGAGAAGGTTCTATTAAGTCACTTGCTAAACTACAAAGATGAGAAAGAAGAAATGCTAACTGATGAGGAAATAGCTGATAATGTAATTGGAGTACTATTTGCAGCTCAAGATACTACAGCAAGTGTCTTAACTTGGATTCTCAAGTACCTTCATGATGATCAGAAACTTCTTGAAGCAGTAAAAGCAGAGCAAATGTCAATATATGAAGCCAATGAAAGAGGGAAGATCCCATTGAGTTGGAATCAAACAAGAAATATGCCAATCACTCATAGGGTAATATTGGAAAGTCTAAGGATGTCAAGTATAATTTCATTTACTTTTAGGGAAGCTGTGGTTGATGTAGTATACAAGGGATATTTAATACCAAAGGGTTGGAAAGTAATGCCACTCTTCAGAAACATCCACCACAATCCAGAATTCTACATTAATCCTCAGAGTTTTGACCCATCAAGATTTGAGGTTTCTCCAAAGCCATATACATTTATGCCATTTGGTAATGGAGTGCACTCTTGTCCTGGAAATGAGCTAGCCAAGTTGAATATGTTGATACTAATTCACCATCTAGTAACCAAGTTTAGGTGGGAGGTAGAAGGATATGAAAGTGGAGTTGAATATAGTCCATTCCCGATCCCAATGCATGGTCTTCCAACAAGATTTTTGAGAGATTAA 1407 0.3767 MEIFAILVCIFLFLSTLVISFPFIKKNKPTSKPKLPPGSMGWPYIGQTLQLYSQHPNIFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTHSHLFKPTYPKSKEKLIGSSALFFHQGDYHTRIRKLVQTSLSPESIKKLIPDIETQVISSLESWVSVGQVINAFCEMKKFSFNIGILSVFGNLENNYREQLKENYSIVEKGYNSFPTRIPGTAYSKALLARKRIHEIISEIICKKREQKLIEKVLLSHLLNYKDEKEEMLTDEEIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAVKAEQMSIYEANERGKIPLSWNQTRNMPITHRVILESLRMSSIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFYINPQSFDPSRFEVSPKPYTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVEGYESGVEYSPFPIPMHGLPTRFLRD 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02608 468 Pfam Cytochrome P450 36 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 PRINTS E-class P450 group I signature 407 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 PRINTS E-class P450 group I signature 417 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 410 419 IPR017972 GO:0005506|GO:0016705
Vifa6g02608 468 Gene3D Cytochrome P450 24 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 CDD CYP90-like 64 464 - -
Vifa6g02608 468 FunFam Abscisic acid 8 25 467 - -
Vifa6g02608 468 PRINTS P450 superfamily signature 408 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 SUPERFAMILY Cytochrome P450 31 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02608 468 PANTHER CYTOCHROME P450 26 33 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02608 Vifa-Chr6 896570942 896573377 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02608 7 467 Cytochrome P450 AT3G19270 70.499 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02608 K09843 - gmx:100806350 821.231