Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02590 ATGGGAGATCGTAAACGCTCTTCTCCAACAATAGTATCCATCAACGAAGCTTCGCTTTCCAAGAAAAGAAAAATCACCGCATCTTCTTCGCACTTTCATCACCAAACTATCTCGCCGGTAACTTCCGTGAATTCCGCTGCCACGGTGTCTTCCGACGAATTTTGCCCGGATCACACTCAACTGCCTCGTTTCAGCTCCGACAAGGTTTTCGAAACGTGCGAAGTCGTTAAGGAACGCGACGCAACGTCGTTAGATCCAGAGCTGAAAACAAAGGGTTTGGAGTCAAACGCAACGAAACGCAATTTGAAGTCGTTCAGGGAGGAGGAGATCGATGAATTCTTTGCGAGGTTCGAGCGGGAGGAACAAAAACGATTTTCTGAAAAGTACAACTTTGATATTGTTAGAGATATGCCGTTGGAGGGTCGTTACGAGTGGGTTCGTTTACATTGA 450 0.4644 MGDRKRSSPTIVSINEASLSKKRKITASSSHFHHQTISPVTSVNSAATVSSDEFCPDHTQLPRFSSDKVFETCEVVKERDATSLDPELKTKGLESNATKRNLKSFREEEIDEFFARFEREEQKRFSEKYNFDIVRDMPLEGRYEWVRLH 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02590 149 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 20 148 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vifa6g02590 149 Gene3D p27 95 149 IPR044898 -
Vifa6g02590 149 PIRSF CKI_KRP_plant 3 149 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vifa6g02590 149 Pfam Cyclin-dependent kinase inhibitor 107 148 IPR003175 GO:0004861|GO:0005634|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02590 Vifa-Chr6 892395771 892396632 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02590 109 148 Core Cell Cycle Gene Families AT1G49620 70.000 2.04e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02590 - - tpra:123924291 171.785