Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02569 ATGAACTCTCACTTTTTCGAGAGTGCAACTGGGGAGAACTTCTGGGACATGCTGAACAAAGATTCTAATTCTGATATACTGATTATGTTTCAAGATGCCATGGAAGCTGATTCTAGAATGTTTAGGCTTTCCCTCAAAGACTGCAGCCATGTGTTTGAGGGTTTGGAGCCTTTGGTTGATGTGGCAGGTGGAACTGGAGTTGTGTCAAAACTCATTCATGAAGCATTTCCTAACATCAAATGCACTGTTTTTGATCAACCACAAGTTGTTGCTAACTTGACTGGAAATGAATATATCAACTTTGTTGGTGGAGATATGTTCAAATCTATCCCTCCTGCTCATGCTGTTTTACTTAAGTGGGTTTTGCATGATTGGGATGATGAGCTCTCTTTAAAGATATTGAAGAATAGCAAAGAAGCAATTTCTCACAAAGGGAAAGATGGAAAAGTGATTATCATTGACATAGCAATTGATGAAACAAGTGATGATCATGGATTAACTGAACTGAAATTGCACTTTGACATGGTAATGTTGACTCTTCACAATGGAAAAAAAAGAGAGAGAAAAGAATCGGAAAAACTCATTTACCATGCAGGCTTTAGTAGGTATAAGATTTTTCCAATATGCGGTTTCAAGTCTCTAATTGAAGTTTATCCTAACTTTAATTAG 669 0.3692 MNSHFFESATGENFWDMLNKDSNSDILIMFQDAMEADSRMFRLSLKDCSHVFEGLEPLVDVAGGTGVVSKLIHEAFPNIKCTVFDQPQVVANLTGNEYINFVGGDMFKSIPPAHAVLLKWVLHDWDDELSLKILKNSKEAISHKGKDGKVIIIDIAIDETSDDHGLTELKLHFDMVMLTLHNGKKRERKESEKLIYHAGFSRYKIFPICGFKSLIEVYPNFN 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02569 222 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 5 218 IPR029063 -
Vifa6g02569 222 PANTHER O-METHYLTRANSFERASE 6 204 IPR016461 GO:0008168
Vifa6g02569 222 FunFam O-methyltransferase ZRP4 1 219 - -
Vifa6g02569 222 Pfam O-methyltransferase domain 3 201 IPR001077 GO:0008171
Vifa6g02569 222 Gene3D Vaccinia Virus protein VP39 1 219 IPR029063 -
Vifa6g02569 222 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 219 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02569 Vifa-Chr6 883726397 883727161 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02569 29 205 Monolignol Biosynthesis Gene Families AT5G54160 39.106 9.60e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02569 K22588 - tpra:123917427 333.183