Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02557 ATGAACAACAACGGTGAATCTGTTGGGGTTGATTTGAACAATATTCACACTGATTCATCTGATGTTGAATATAGTTGTGATGAAGATGCTAATGTTGATGTAAAACAAAGTTCAAATGATGAAGATGATTCTAATAATGACAATGATGAGGAATCTGTTGGAATAGAGTTGTCAAATAGCCAAGCAGTTGTAGGTGATCACATGGTGAATATAAATTCCATTACTCCAGATGAAATTCATGCTATGGAATTTGGAACTGTGAGTGAAGCTTATGAATTTTATTATAGGTATGAAAAATGTAAAGGTTTTTTCATTAGGAAAAGCAATGTTAGGCAAAGAGGGCCCGAAGGTAGTGAAATAGTAGTAATGAGACAATTTGTATGCAACAAACATGGATTAAGAGACAAGAAGCACTTAACTAGGGTAGATAGGAAAAGAGATCACCAAAGTCTGACCGGTACTGAATGTGCAGGGTGCATGGTTGCTCAAAAAGGTGGATATAATGATATTGGTTTTTACAAAGAAGATTTGTACAATTATTCTGATAAAAAATTGTTTGATGTTATTAAAGATAGTGATGTTGCTCCTGCTTTAAATCATCTCAAAGTGAAATCATTTATGGATCATATGTTATATGCAGAATATTCTATCAATAGTGATGGAAGATTGAAGTCGCTTTTTTGGGCAGATGGCAGTAGTAGATCAGACTATTTATGTTTTGGTGATGTTCTTGCGTTTGAAACAACTTACAAGAAGAACAAATACAATTATCCATTGGTTATATTTTCTGGTTGCAACCACCACTCACAAACTGTTATATTTGGTGTTGCATTTGTGTCAGATGAAACGACAGAGACGTATAAGTGGTAG 870 0.3402 MNNNGESVGVDLNNIHTDSSDVEYSCDEDANVDVKQSSNDEDDSNNDNDEESVGIELSNSQAVVGDHMVNINSITPDEIHAMEFGTVSEAYEFYYRYEKCKGFFIRKSNVRQRGPEGSEIVVMRQFVCNKHGLRDKKHLTRVDRKRDHQSLTGTECAGCMVAQKGGYNDIGFYKEDLYNYSDKKLFDVIKDSDVAPALNHLKVKSFMDHMLYAEYSINSDGRLKSLFWADGSSRSDYLCFGDVLAFETTYKKNKYNYPLVIFSGCNHHSQTVIFGVAFVSDETTETYKW 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02557 289 MobiDBLite consensus disorder prediction 1 53 - -
Vifa6g02557 289 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 79 289 IPR031052 GO:0006355
Vifa6g02557 289 Pfam MULE transposase domain 243 289 IPR018289 -
Vifa6g02557 289 MobiDBLite consensus disorder prediction 1 20 - -
Vifa6g02557 289 MobiDBLite consensus disorder prediction 28 42 - -
Vifa6g02557 289 Pfam FAR1 DNA-binding domain 92 164 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02557 Vifa-Chr6 878184051 878185113 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vifa6g02557 FAR1 1.2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02557 - - tpra:123910027 288.885