Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02534 ATGATAACCTTTGGTAGTACACAATCATTTGTCTCTATTATGCATATTTTCATGCTTATCTTGTTATGTTTTATGGCTAAAATTGAAGCTTCCAATAGTAAAGTCTCTGCCGTTTATGTGTTTGGAGATTCGACAGTAGACCCGGGAAACAACAACTACGTGAACACACCTTTCAAGAGTGATTTTCCACCTTATGGTAGAGATTTTCCAAACCAAAGTCCCACAGGAAGGTTCACAAATGGAAAACTTGGCATTGATTTTATAGCTTCGTATTTAGGTTTGAAAGAGTTGGTGCCACCATATTTAGATCCAAATCTGAGTGATGAAGAGGTTATGACAGGAGTTAGTTTTGCTTCTGCTGGTTCTGGTTTTGACCCACTCACACCAACTCTCACTAATGTTGTCCCAATATCAAAGCAACTAGAATATTTCAAACAATACAAAAATCGGTTGGAGAATAAGCTTGGTAAGCAAGAAACTGAAAATCATATCAACAAGGCTATATTTATCATAAGCGCGGGTACAAATGATTTCGTTGTTAATTATTTTATGGTGCCAATACGAAGAAGAAGCTATAACGTCGCAGCTTATGGTCATTTCTTGCTTCAACATGTCAAAGTTTTCATGCAGAATTTGTTAACAGAAGGTGCTAGAAAAATTGGTTTTGTTGGATTACCTCCATTGGGATGTTTGCCAATCATGATTACCTTAAATTCCAACAATGCATTTCTTGAACGTAGTTGTGTGGACAAATATTCAGCTGTGGCAAGAGATCACAACATGGTGCTTCAACATGAATTGTTCTTAATGCAACTTAATTCCACTAAGATCTCTTACATTGACATATATGGACCCTTAGTTAACATGATTCAAGGACATGCAAATCTTGGATTTGATGAGGTTGATAGAGGCTGTTGTGGAAGTGGTTTAATTGAAGCAACATTTATGTGTAATCGTAATTCACATGTATGTTCTGATCCATCAAAATATGTGTTTTGGGATTCAATACACCCTACAGAGAAGGTATATCATAACCTATTTGTTGCAAACCGTCACCTCATTGATGCCCTTATCAACGGCTAG 1083 0.3666 MITFGSTQSFVSIMHIFMLILLCFMAKIEASNSKVSAVYVFGDSTVDPGNNNYVNTPFKSDFPPYGRDFPNQSPTGRFTNGKLGIDFIASYLGLKELVPPYLDPNLSDEEVMTGVSFASAGSGFDPLTPTLTNVVPISKQLEYFKQYKNRLENKLGKQETENHINKAIFIISAGTNDFVVNYFMVPIRRRSYNVAAYGHFLLQHVKVFMQNLLTEGARKIGFVGLPPLGCLPIMITLNSNNAFLERSCVDKYSAVARDHNMVLQHELFLMQLNSTKISYIDIYGPLVNMIQGHANLGFDEVDRGCCGSGLIEATFMCNRNSHVCSDPSKYVFWDSIHPTEKVYHNLFVANRHLIDALING 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02534 360 CDD SGNH_plant_lipase_like 37 360 IPR035669 -
Vifa6g02534 360 Pfam GDSL-like Lipase/Acylhydrolase 38 346 IPR001087 GO:0016788
Vifa6g02534 360 Gene3D SGNH hydrolase 24 354 IPR036514 -
Vifa6g02534 360 FunFam GDSL esterase/lipase APG 27 353 - -
Vifa6g02534 360 PANTHER GDSL ESTERASE/LIPASE EXL3 21 346 - -
Vifa6g02534 360 SUPERFAMILY SGNH hydrolase 164 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02534 Vifa-Chr6 872002408 872003860 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02534 12 360 Pollen Coat Proteome AT1G75910 31.844 1.55e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02534 - - gmx:100804919 556.984