Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02528 ATGAAGAAGATTTCGAAGAGCAGCTGCAAATCTGCGTCGCACCGGCTTTTTAAGGACAAGGCAAAGAACCGCGTTGATGACCTGCAGCTGACATTCATGGATTTGCAGTTTGCTAGGAAGGAGAGCCGAACTGTTGATGCTGCGGTTCTGGAGGAGCAAGTTCATCAGATGCTTCGTGAGTGGAAGGCTGAACTTAATGAGCCTTCTCCTGCTTCTTCTTTGCAGCAAGGTGGGAGTCTCGGGTCATTCTCCACCGATATCTGCCGGCTTTTGCAGCTTTGTGAGGAAGAAGATGATGCCTCTAGTCCATTAGCTGCACCTAAACCTGAACCTAATGACCAGGCTCTTCAGGCTGGGGATAAAATCATTTTTCAAGCGGGCCAGCAGCAACATGATTTCCCATTGGTTGATGAGCGCAAGCAGTCAACCTCAGGAGTTCAAACTGTGGCAACTAACAACCAGGATGGGCCTGCTTTAGAATATCACCAGTTTGATTTACATCAAGACTTTGATCACAGCTTATATACTGGTTTCAATGGTACAGGTTACTCTGAGGAGGAAGCTATTCCTCATATATCTAGCTATCTACCAAGTACATGCCCTCCTCCTTCTGCTTTCTTGGGCCCAAAGTGTGCACTTTGGGACTGTCCAAGGCCTGCACAAGGGTTGGACTGGTGTCAAGATTATTGCAGTAGCTTTCATGCTGCTCTAGCTTTGAATGAAGGGCCACCAGGCATGGCCCCAGTTCTTCGTCCTGGAGGCATTGGTTTAAAGGATAATTTACTCTTTTCTGCTCTTAGTGCAAAGGCACAAGGAAAAGATGTTGGCATCCCAGAGTGCGAGGGAGCAGCAACTGCTAAGTCTCCATGGAACGCACCTGAGCTCTTTGATCTTTCTGTTCTTGAGGGTGAGACTATTAGGGAATGGCTTTTCTTCGATAAGCCTCGAAGAGCATTTGAAAGTGGAAACAGAAAGCAGAGGTCCTTGCCAGATTACAGTGGGCGTGGTTGGCATGAATCTAGAAAGCAAGTTATCAATGAATTTGGAGGTCTGAAGAGATCCTATTATATGGATCCACAACCACTGAACCATTTTGAATGGCACCTCTACGAATATGAGATTAGCAAGTGTGATGTATGTGCCTTGTACCGTTTAGAACTAAAGCTTGTTGATGGGAAGAAGAACTCCAAGGCAAAAGTAGCAAATGATTCAGTTGCTGATTTGCAGAAACAGATGGTAAAGCTTTCTGCTGAGTTTCCTCCTGATAACAAAAGGCCGGCCAAAGGCAGAGCCAAGATTAATGCCAAAGTTGGCATGGCTGCTGTCTATCCAGCTTCACACAGAGTGACCCCTCTAAATGGAACATACGAATATGGGTTAGCTGCACCATATGACTATCTTGCTGAGAACGTGGGCGATTATTATGGGACATGA 1434 0.4616 MKKISKSSCKSASHRLFKDKAKNRVDDLQLTFMDLQFARKESRTVDAAVLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPNDQALQAGDKIIFQAGQQQHDFPLVDERKQSTSGVQTVATNNQDGPALEYHQFDLHQDFDHSLYTGFNGTGYSEEEAIPHISSYLPSTCPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFSALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVINEFGGLKRSYYMDPQPLNHFEWHLYEYEISKCDVCALYRLELKLVDGKKNSKAKVANDSVADLQKQMVKLSAEFPPDNKRPAKGRAKINAKVGMAAVYPASHRVTPLNGTYEYGLAAPYDYLAENVGDYYGT 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02528 477 PANTHER TRANSCRIPTION FACTOR VOZ1 1 472 IPR039277 GO:0006355|GO:0048578
Vifa6g02528 477 Coils Coil 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02528 Vifa-Chr6 869894862 869898627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02528 3 475 VOZ-9 Transcription Factor Family AT1G28520 69.654 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Vifa6g02528 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02528 - - gmx:100798565 898.656