Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa6g02506 ATGAATATGATGAATAATTTACTCTCATCTTCAACCCTGCCAATTACCATATGCGCTACGTTCTTGTTTCTCTACGTTCTCTTTTGGTTACGTAGAAGCAAAACTAGTACAACCGGTGTTGCACCAAAAAAAACACCACCAGAAGTCGCCGGAGCTTGGCCTTTAATCGGCCACCTCCACCTCTTGAGCGGGTCCCAGCCACCTCACGTCACGTTAGGGAAATTAGCCGACAAATACGGACCCATCTTCACCTTACGTTTGGGTGTTCATCGAACCTTAGTTGTAAGCAGTTACGAAATGGCGAAAGAGTGTTTCACAGTAAACGACAAAGCGTTTGCTTCCCGACCAAAATCTGTAGCCTTTGAAATTCTGGGGTATAATTTCTCCATGATTGGTTTCAGCCCATACGGTTCCTACTGGCGCACCATGCGCAAGATAGCGACCGTTCATGTTCTTTCAGCTCATCGGACAGAGACATTGCTGAAAGACGTGATGGAATCAGAGGTTAAGATAGCAATGAAAGAGAGTTATGAGTTTTGGGAAAAGATGAAGAATAACAAGGATAGGAATGAAAGGGCAATTACGGAAATGAAGAAATGGTTTGGGGACATAGCGATTAACGTTCTGTTTAGAACGGTGGTGGGAAAACGGTTTGACGGTGACGAGGAAGAGAATCAACGGATTAGAAAAGCGCTTAGGGGCTTGTTTGATCTTACTGGTTCGTTTGTTATCTGTGACACGTTACCGTATTTGAGATGGTTGGATTTGGATGGAAAAGAGAAGGAAATGAAGAAAACCGCGAAAGTGTTGGATGAGTTTGTTTGTGTTTGGCTTGATCAGCATAAACGGAATAGGAAACCTGCCGGCGGCGAACATGACTTCATGGATGTTCTTCTTTCCACCGTTGATGATCAAGATTTGGACGGTCGTGATTCCGACACCGCAATCAAAGCTACTTGTCTGGCACTAATTCTAGCAGGTACAGACACTACAGCAGGAACATTAACTTGGATACTATCTTTACTTCTTAACAATCGTGAAGTACTAAGCAAAGCCACTCAGGAACTAGATGCACAAGTTGGCATGGAAAACATGGCAATAAAATCAGATTTGACAAAGTTGAAATATATTCAAGCCATTATCAAAGAAACATTACGTTTGTACCCACCAGCGCCACTCAATGTTCCACATGAGTCTATTGAAGATTGTACCGTAGGTGGGTACCACATTCCAGCTGGCACGCGTCTACTAACCAACTTTTCGAAACTTCAACGAGACCCTATGTTATACTCGGATCCGTTGGAGTTTCGACCAGAGAGATTTCTTACAACACACATGAATGTTGATGTGAAGGGACAACATTTTGAGTTGATTCCATTTGGTGTTGGTAGACGAATGTGTCCTGGAATATCATTTGCTCTTCAATTAATGCAAATAACACTTGCTACTTTATTGCATGGTTTTGATATAGTGACTTCTGATGAAGAACCTGTCGATATGGCTGAACATAACGGGCTCACTACAATCAAAGCCTCTCCTCTCCAAGTCGTTCTCACTCCACGCTTGTCTGCTCAAACTTTTAGTCAAAATTAA 1593 0.4269 MNMMNNLLSSSTLPITICATFLFLYVLFWLRRSKTSTTGVAPKKTPPEVAGAWPLIGHLHLLSGSQPPHVTLGKLADKYGPIFTLRLGVHRTLVVSSYEMAKECFTVNDKAFASRPKSVAFEILGYNFSMIGFSPYGSYWRTMRKIATVHVLSAHRTETLLKDVMESEVKIAMKESYEFWEKMKNNKDRNERAITEMKKWFGDIAINVLFRTVVGKRFDGDEEENQRIRKALRGLFDLTGSFVICDTLPYLRWLDLDGKEKEMKKTAKVLDEFVCVWLDQHKRNRKPAGGEHDFMDVLLSTVDDQDLDGRDSDTAIKATCLALILAGTDTTAGTLTWILSLLLNNREVLSKATQELDAQVGMENMAIKSDLTKLKYIQAIIKETLRLYPPAPLNVPHESIEDCTVGGYHIPAGTRLLTNFSKLQRDPMLYSDPLEFRPERFLTTHMNVDVKGQHFELIPFGVGRRMCPGISFALQLMQITLATLLHGFDIVTSDEEPVDMAEHNGLTTIKASPLQVVLTPRLSAQTFSQN 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa6g02506 530 FunFam Cytochrome P450 82C4 37 519 - -
Vifa6g02506 530 Gene3D Cytochrome P450 41 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 Pfam Cytochrome P450 49 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Vifa6g02506 530 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa6g02506 530 CDD CYP82 80 521 - -
Vifa6g02506 530 PANTHER CYTOCHROME P450 82C3-RELATED 22 525 - -
Vifa6g02506 530 SUPERFAMILY Cytochrome P450 47 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa6g02506 Vifa-Chr6 863151073 863153161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa6g02506 47 527 Cytochrome P450 AT4G31940 48.790 4.65e-169 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa6g02506 - - mtr:25493100 773.467